Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.89■□□□□ 0.29
RHBDL3P58872 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.89■□□□□ 0.29
RHBDL3P58872 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.89■□□□□ 0.29
RHBDL3P58872 AC091769.1-201ENST00000619576 568 ntBASIC16.89■□□□□ 0.29
RHBDL3P58872 HLA-C-210ENST00000640219 976 ntBASIC16.89■□□□□ 0.29
RHBDL3P58872 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RHBDL3P58872 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDL3P58872 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDL3P58872 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RHBDL3P58872 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 AC019109.1-201ENST00000401725 1874 ntBASIC16.88■□□□□ 0.29
RHBDL3P58872 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RHBDL3P58872 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.88■□□□□ 0.29
RHBDL3P58872 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.88■□□□□ 0.29
RHBDL3P58872 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RHBDL3P58872 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.88■□□□□ 0.29
RHBDL3P58872 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.88■□□□□ 0.29
RHBDL3P58872 LINC00634-202ENST00000505157 222 ntBASIC16.88■□□□□ 0.29
RHBDL3P58872 SLC25A15P3-201ENST00000505530 290 ntBASIC16.88■□□□□ 0.29
RHBDL3P58872 AC145285.5-201ENST00000562217 361 ntBASIC16.88■□□□□ 0.29
RHBDL3P58872 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.88■□□□□ 0.29
RHBDL3P58872 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.88■□□□□ 0.29
RHBDL3P58872 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.88■□□□□ 0.29
RHBDL3P58872 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.88■□□□□ 0.29
RHBDL3P58872 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.88■□□□□ 0.29
RHBDL3P58872 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RHBDL3P58872 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RHBDL3P58872 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.88■□□□□ 0.29
RHBDL3P58872 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
RHBDL3P58872 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RHBDL3P58872 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 INTS4P1-203ENST00000641008 3683 ntBASIC16.88■□□□□ 0.29
RHBDL3P58872 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHBDL3P58872 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.87■□□□□ 0.29
RHBDL3P58872 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.87■□□□□ 0.29
RHBDL3P58872 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.87■□□□□ 0.29
RHBDL3P58872 AC106881.1-201ENST00000605849 3329 ntBASIC16.87■□□□□ 0.29
RHBDL3P58872 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RHBDL3P58872 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.87■□□□□ 0.29
RHBDL3P58872 AC114501.1-201ENST00000445949 172 ntBASIC16.87■□□□□ 0.29
RHBDL3P58872 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
RHBDL3P58872 GOLGA2P8-201ENST00000505201 779 ntBASIC16.87■□□□□ 0.29
RHBDL3P58872 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.87■□□□□ 0.29
RHBDL3P58872 IGHV1-12-201ENST00000518307 205 ntBASIC16.87■□□□□ 0.29
RHBDL3P58872 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.87■□□□□ 0.29
RHBDL3P58872 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.87■□□□□ 0.29
RHBDL3P58872 LINC00244-201ENST00000625073 613 ntBASIC16.87■□□□□ 0.29
RHBDL3P58872 AC127024.7-201ENST00000625101 200 ntBASIC16.87■□□□□ 0.29
RHBDL3P58872 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.87■□□□□ 0.29
RHBDL3P58872 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RHBDL3P58872 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHBDL3P58872 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms