Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.38□□□□□ -0.27
CLDN20P56880 AC100850.1-201ENST00000506768 649 ntBASIC13.38□□□□□ -0.27
CLDN20P56880 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 AC131206.1-201ENST00000538078 1211 ntBASIC13.38□□□□□ -0.27
CLDN20P56880 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN20P56880 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 AC244157.2-201ENST00000616239 1006 ntBASIC13.38□□□□□ -0.27
CLDN20P56880 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.38□□□□□ -0.27
CLDN20P56880 AP001002.3-201ENST00000623482 206 ntBASIC13.38□□□□□ -0.27
CLDN20P56880 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CLDN20P56880 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN20P56880 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.38□□□□□ -0.27
CLDN20P56880 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CLDN20P56880 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.37□□□□□ -0.27
CLDN20P56880 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN20P56880 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 AC108725.1-201ENST00000495472 409 ntBASIC13.37□□□□□ -0.27
CLDN20P56880 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN20P56880 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CLDN20P56880 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 AL096828.3-201ENST00000615354 462 ntBASIC13.37□□□□□ -0.27
CLDN20P56880 AL136301.1-201ENST00000615830 422 ntBASIC13.37□□□□□ -0.27
CLDN20P56880 MIR6799-201ENST00000620297 69 ntBASIC13.37□□□□□ -0.27
CLDN20P56880 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CLDN20P56880 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN20P56880 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN20P56880 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms