Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CPT1AP50416 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 CTBP2P8-201ENST00000422584 1330 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.9■□□□□ 0.14
CPT1AP50416 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
CPT1AP50416 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.89■□□□□ 0.13
CPT1AP50416 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.89■□□□□ 0.13
CPT1AP50416 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.89■□□□□ 0.13
CPT1AP50416 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.89■□□□□ 0.13
CPT1AP50416 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CPT1AP50416 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CPT1AP50416 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.89■□□□□ 0.13
CPT1AP50416 ACTG1P19-201ENST00000418987 1116 ntBASIC15.89■□□□□ 0.13
CPT1AP50416 GNG10P1-201ENST00000452289 199 ntBASIC15.89■□□□□ 0.13
CPT1AP50416 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.89■□□□□ 0.13
CPT1AP50416 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.89■□□□□ 0.13
CPT1AP50416 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.89■□□□□ 0.13
CPT1AP50416 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.89■□□□□ 0.13
CPT1AP50416 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 AC141586.1-203ENST00000567242 366 ntBASIC15.89■□□□□ 0.13
CPT1AP50416 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.89■□□□□ 0.13
CPT1AP50416 AC073592.2-201ENST00000623062 780 ntBASIC15.89■□□□□ 0.13
CPT1AP50416 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CPT1AP50416 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CPT1AP50416 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.89■□□□□ 0.13
CPT1AP50416 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.89■□□□□ 0.13
CPT1AP50416 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.89■□□□□ 0.13
CPT1AP50416 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CPT1AP50416 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPT1AP50416 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.89■□□□□ 0.13
CPT1AP50416 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CPT1AP50416 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CPT1AP50416 RNVU1-8-201ENST00000364272 125 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CPT1AP50416 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CPT1AP50416 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CPT1AP50416 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.88■□□□□ 0.13
CPT1AP50416 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.88■□□□□ 0.13
CPT1AP50416 CHCHD2P2-201ENST00000503744 321 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.88■□□□□ 0.13
CPT1AP50416 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 KRT8P2-201ENST00000556193 944 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 SNORD3B-1-201ENST00000577988 758 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 AL359091.4-201ENST00000610052 409 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 AC011471.3-201ENST00000623576 402 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CPT1AP50416 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.88■□□□□ 0.13
CPT1AP50416 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.88■□□□□ 0.13
CPT1AP50416 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 LINC00115-201ENST00000473798 1317 ntBASIC15.88■□□□□ 0.13
CPT1AP50416 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CPT1AP50416 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.88■□□□□ 0.13
CPT1AP50416 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms