Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AC138035.3-201ENST00000622706 2791 ntBASIC24.49■■□□□ 1.51
NCAPD3P42695 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
NCAPD3P42695 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC24.49■■□□□ 1.51
NCAPD3P42695 HPD-204ENST00000543163 1709 ntTSL 5 BASIC24.49■■□□□ 1.51
NCAPD3P42695 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC24.49■■□□□ 1.51
NCAPD3P42695 SNORA47-201ENST00000458862 138 ntBASIC24.49■■□□□ 1.51
NCAPD3P42695 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC24.49■■□□□ 1.51
NCAPD3P42695 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC24.49■■□□□ 1.51
NCAPD3P42695 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC24.49■■□□□ 1.51
NCAPD3P42695 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NCAPD3P42695 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
NCAPD3P42695 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
NCAPD3P42695 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
NCAPD3P42695 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
NCAPD3P42695 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC24.48■■□□□ 1.51
NCAPD3P42695 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC24.48■■□□□ 1.51
NCAPD3P42695 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
NCAPD3P42695 RBMXP1-201ENST00000408004 1191 ntBASIC24.48■■□□□ 1.51
NCAPD3P42695 WDR54-202ENST00000409791 854 ntTSL 3 BASIC24.48■■□□□ 1.51
NCAPD3P42695 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC24.48■■□□□ 1.51
NCAPD3P42695 ACTG1P23-201ENST00000437653 1074 ntBASIC24.48■■□□□ 1.51
NCAPD3P42695 KRT18P42-201ENST00000505048 1255 ntBASIC24.48■■□□□ 1.51
NCAPD3P42695 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC24.48■■□□□ 1.51
NCAPD3P42695 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC24.48■■□□□ 1.51
NCAPD3P42695 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
NCAPD3P42695 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC24.48■■□□□ 1.51
NCAPD3P42695 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
NCAPD3P42695 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC24.47■■□□□ 1.51
NCAPD3P42695 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 USP17L6P-201ENST00000382470 1197 ntBASIC24.47■■□□□ 1.51
NCAPD3P42695 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC24.47■■□□□ 1.51
NCAPD3P42695 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC24.47■■□□□ 1.51
NCAPD3P42695 AL450346.2-201ENST00000495602 1024 ntBASIC24.47■■□□□ 1.51
NCAPD3P42695 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 AC022447.6-201ENST00000515522 438 ntBASIC24.47■■□□□ 1.51
NCAPD3P42695 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC24.47■■□□□ 1.51
NCAPD3P42695 DERL2-206ENST00000572834 589 ntTSL 3 BASIC24.47■■□□□ 1.51
NCAPD3P42695 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC24.47■■□□□ 1.51
NCAPD3P42695 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC24.47■■□□□ 1.51
NCAPD3P42695 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
NCAPD3P42695 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC24.47■■□□□ 1.51
NCAPD3P42695 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC24.47■■□□□ 1.51
NCAPD3P42695 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
NCAPD3P42695 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 ZEB1-AS1-208ENST00000607166 2503 ntBASIC24.47■■□□□ 1.51
NCAPD3P42695 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC24.47■■□□□ 1.51
NCAPD3P42695 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
NCAPD3P42695 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
NCAPD3P42695 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
NCAPD3P42695 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
NCAPD3P42695 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC24.46■■□□□ 1.51
NCAPD3P42695 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC24.46■■□□□ 1.51
NCAPD3P42695 RPSAP16-201ENST00000447583 821 ntBASIC24.46■■□□□ 1.51
NCAPD3P42695 RN7SL33P-201ENST00000462543 342 ntBASIC24.46■■□□□ 1.51
NCAPD3P42695 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC24.46■■□□□ 1.51
NCAPD3P42695 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC24.46■■□□□ 1.51
NCAPD3P42695 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC24.46■■□□□ 1.51
NCAPD3P42695 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC24.46■■□□□ 1.51
NCAPD3P42695 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC24.46■■□□□ 1.51
NCAPD3P42695 PPY-202ENST00000587006 431 ntTSL 3 BASIC24.46■■□□□ 1.51
NCAPD3P42695 AC005332.2-201ENST00000590010 930 ntBASIC24.46■■□□□ 1.51
NCAPD3P42695 AC009812.1-201ENST00000605948 1059 ntBASIC24.46■■□□□ 1.51
NCAPD3P42695 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
NCAPD3P42695 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC24.46■■□□□ 1.51
NCAPD3P42695 CDIPT-AS1-203ENST00000638164 713 ntBASIC24.46■■□□□ 1.51
NCAPD3P42695 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
NCAPD3P42695 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC24.46■■□□□ 1.51
NCAPD3P42695 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC24.46■■□□□ 1.51
NCAPD3P42695 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NCAPD3P42695 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms