Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.73□□□□□ -0.37
GDNFP39905 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
GDNFP39905 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
GDNFP39905 AP002761.4-201ENST00000565433 3361 ntBASIC12.73□□□□□ -0.37
GDNFP39905 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.73□□□□□ -0.37
GDNFP39905 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 NCLP1-201ENST00000445357 1963 ntBASIC12.72□□□□□ -0.37
GDNFP39905 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.72□□□□□ -0.37
GDNFP39905 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
GDNFP39905 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.72□□□□□ -0.37
GDNFP39905 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.72□□□□□ -0.37
GDNFP39905 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
GDNFP39905 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 MIR6074-201ENST00000612054 107 ntBASIC12.72□□□□□ -0.37
GDNFP39905 MIR8072-201ENST00000614241 80 ntBASIC12.72□□□□□ -0.37
GDNFP39905 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.72□□□□□ -0.37
GDNFP39905 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
GDNFP39905 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
GDNFP39905 AL445209.1-201ENST00000607269 3491 ntBASIC12.72□□□□□ -0.37
GDNFP39905 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
GDNFP39905 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GDNFP39905 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.72□□□□□ -0.37
GDNFP39905 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.71□□□□□ -0.37
GDNFP39905 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.71□□□□□ -0.37
GDNFP39905 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.71□□□□□ -0.37
GDNFP39905 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.71□□□□□ -0.37
GDNFP39905 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GDNFP39905 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.71□□□□□ -0.37
GDNFP39905 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 STK33P1-201ENST00000423835 1218 ntBASIC12.71□□□□□ -0.37
GDNFP39905 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.71□□□□□ -0.37
GDNFP39905 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.71□□□□□ -0.37
GDNFP39905 FAM86LP-201ENST00000478302 853 ntBASIC12.71□□□□□ -0.37
GDNFP39905 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.71□□□□□ -0.37
GDNFP39905 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.71□□□□□ -0.37
GDNFP39905 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.71□□□□□ -0.37
GDNFP39905 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms