Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 AC015688.4-201ENST00000580780 1647 ntBASIC13.97□□□□□ -0.17
HTR1EP28566 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HTR1EP28566 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HTR1EP28566 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.97□□□□□ -0.17
HTR1EP28566 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.97□□□□□ -0.17
HTR1EP28566 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.97□□□□□ -0.17
HTR1EP28566 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.97□□□□□ -0.17
HTR1EP28566 SOCS2P1-201ENST00000417727 557 ntBASIC13.97□□□□□ -0.17
HTR1EP28566 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 AC134915.1-201ENST00000426461 574 ntBASIC13.97□□□□□ -0.17
HTR1EP28566 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
HTR1EP28566 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
HTR1EP28566 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 AC093813.1-201ENST00000605066 256 ntBASIC13.97□□□□□ -0.17
HTR1EP28566 AC091271.1-201ENST00000611877 1162 ntBASIC13.97□□□□□ -0.17
HTR1EP28566 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.97□□□□□ -0.17
HTR1EP28566 BX539320.1-201ENST00000623759 877 ntBASIC13.97□□□□□ -0.17
HTR1EP28566 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.97□□□□□ -0.17
HTR1EP28566 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HTR1EP28566 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HTR1EP28566 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.96□□□□□ -0.17
HTR1EP28566 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.96□□□□□ -0.17
HTR1EP28566 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
HTR1EP28566 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HTR1EP28566 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.96□□□□□ -0.17
HTR1EP28566 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.96□□□□□ -0.17
HTR1EP28566 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.96□□□□□ -0.17
HTR1EP28566 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HTR1EP28566 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 ELK2AP-201ENST00000392510 1007 ntBASIC13.96□□□□□ -0.17
HTR1EP28566 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.96□□□□□ -0.17
HTR1EP28566 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.96□□□□□ -0.17
HTR1EP28566 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.96□□□□□ -0.17
HTR1EP28566 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.96□□□□□ -0.17
HTR1EP28566 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 RPL13AP25-201ENST00000484130 612 ntBASIC13.96□□□□□ -0.17
HTR1EP28566 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.96□□□□□ -0.17
HTR1EP28566 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.96□□□□□ -0.17
HTR1EP28566 BRI3BPP1-201ENST00000594224 787 ntBASIC13.96□□□□□ -0.17
HTR1EP28566 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.96□□□□□ -0.17
HTR1EP28566 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1EP28566 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.18
HTR1EP28566 AC068760.1-201ENST00000493579 1953 ntBASIC13.96□□□□□ -0.18
HTR1EP28566 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HTR1EP28566 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.96□□□□□ -0.18
HTR1EP28566 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.96□□□□□ -0.18
HTR1EP28566 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1EP28566 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1EP28566 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1EP28566 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1EP28566 AGAP10P-201ENST00000454844 2418 ntBASIC13.95□□□□□ -0.18
HTR1EP28566 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1EP28566 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1EP28566 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1EP28566 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HTR1EP28566 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1EP28566 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1EP28566 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms