Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.65□□□□□ -0.22
CHMP24386 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.65□□□□□ -0.22
CHMP24386 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.65□□□□□ -0.22
CHMP24386 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.65□□□□□ -0.22
CHMP24386 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.65□□□□□ -0.22
CHMP24386 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.65□□□□□ -0.22
CHMP24386 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.65□□□□□ -0.22
CHMP24386 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.65□□□□□ -0.22
CHMP24386 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.65□□□□□ -0.22
CHMP24386 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.65□□□□□ -0.22
CHMP24386 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 RN7SL832P-201ENST00000607781 1756 ntBASIC13.65□□□□□ -0.22
CHMP24386 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.65□□□□□ -0.22
CHMP24386 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CHMP24386 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHMP24386 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHMP24386 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHMP24386 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CHMP24386 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.64□□□□□ -0.23
CHMP24386 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHMP24386 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CHMP24386 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 POM121L8P-201ENST00000417732 1281 ntBASIC13.64□□□□□ -0.23
CHMP24386 AC026954.1-201ENST00000429771 1293 ntBASIC13.64□□□□□ -0.23
CHMP24386 POM121L9P-203ENST00000441984 1285 ntBASIC13.64□□□□□ -0.23
CHMP24386 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.64□□□□□ -0.23
CHMP24386 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.64□□□□□ -0.23
CHMP24386 DUX4L45-201ENST00000566406 1057 ntBASIC13.64□□□□□ -0.23
CHMP24386 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.64□□□□□ -0.23
CHMP24386 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.64□□□□□ -0.23
CHMP24386 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.64□□□□□ -0.23
CHMP24386 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms