Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP1P11387 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP1P11387 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TOP1P11387 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.06■□□□□ 0.32
TOP1P11387 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TOP1P11387 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TOP1P11387 KRT18P36-201ENST00000411618 1276 ntBASIC17.06■□□□□ 0.32
TOP1P11387 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP1P11387 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
TOP1P11387 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP1P11387 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
TOP1P11387 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.06■□□□□ 0.32
TOP1P11387 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.06■□□□□ 0.32
TOP1P11387 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP1P11387 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP1P11387 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP1P11387 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TOP1P11387 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TOP1P11387 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TOP1P11387 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TOP1P11387 AL157791.1-201ENST00000553667 1699 ntBASIC17.05■□□□□ 0.32
TOP1P11387 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TOP1P11387 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.05■□□□□ 0.32
TOP1P11387 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 XBP1P1-201ENST00000436573 652 ntBASIC17.05■□□□□ 0.32
TOP1P11387 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 AC003686.1-201ENST00000550956 1034 ntBASIC17.05■□□□□ 0.32
TOP1P11387 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.05■□□□□ 0.32
TOP1P11387 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.05■□□□□ 0.32
TOP1P11387 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.05■□□□□ 0.32
TOP1P11387 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.05■□□□□ 0.32
TOP1P11387 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.05■□□□□ 0.32
TOP1P11387 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP1P11387 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TOP1P11387 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP1P11387 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TOP1P11387 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.04■□□□□ 0.32
TOP1P11387 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP1P11387 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TOP1P11387 AC113367.3-201ENST00000508316 1912 ntBASIC17.04■□□□□ 0.32
TOP1P11387 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms