Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC20.67■□□□□ 0.9
CHGAP10645 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHGAP10645 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHGAP10645 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.67■□□□□ 0.9
CHGAP10645 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC20.67■□□□□ 0.9
CHGAP10645 KRT17P4-201ENST00000429445 819 ntBASIC20.67■□□□□ 0.9
CHGAP10645 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC20.67■□□□□ 0.9
CHGAP10645 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC20.67■□□□□ 0.9
CHGAP10645 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.67■□□□□ 0.9
CHGAP10645 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.67■□□□□ 0.9
CHGAP10645 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 CTBP2P8-201ENST00000422584 1330 ntBASIC20.67■□□□□ 0.9
CHGAP10645 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.67■□□□□ 0.9
CHGAP10645 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 AC105917.1-201ENST00000506637 2539 ntBASIC20.67■□□□□ 0.9
CHGAP10645 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGAP10645 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
CHGAP10645 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGAP10645 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.66■□□□□ 0.9
CHGAP10645 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.66■□□□□ 0.9
CHGAP10645 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHGAP10645 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 AQP7P5-201ENST00000428759 1049 ntBASIC20.66■□□□□ 0.9
CHGAP10645 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC20.66■□□□□ 0.9
CHGAP10645 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC20.66■□□□□ 0.9
CHGAP10645 AQP7P4-201ENST00000447083 1042 ntBASIC20.66■□□□□ 0.9
CHGAP10645 AQP7P2-201ENST00000453967 1041 ntBASIC20.66■□□□□ 0.9
CHGAP10645 RN7SL564P-201ENST00000496309 250 ntBASIC20.66■□□□□ 0.9
CHGAP10645 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC20.66■□□□□ 0.9
CHGAP10645 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 NDUFB10P1-201ENST00000567319 521 ntBASIC20.66■□□□□ 0.9
CHGAP10645 RN7SL602P-201ENST00000578326 324 ntBASIC20.66■□□□□ 0.9
CHGAP10645 AC012073.1-201ENST00000606114 1108 ntBASIC20.66■□□□□ 0.9
CHGAP10645 AQP7P3-201ENST00000624547 1041 ntBASIC20.66■□□□□ 0.9
CHGAP10645 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHGAP10645 AC025183.3-201ENST00000623526 1482 ntBASIC20.66■□□□□ 0.9
CHGAP10645 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHGAP10645 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.66■□□□□ 0.9
CHGAP10645 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHGAP10645 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHGAP10645 AC013268.4-201ENST00000637413 2228 ntBASIC20.66■□□□□ 0.9
CHGAP10645 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CHGAP10645 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHGAP10645 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.66■□□□□ 0.9
CHGAP10645 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHGAP10645 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGAP10645 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHGAP10645 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
CHGAP10645 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHGAP10645 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms