Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 CR383656.2-201ENST00000548656 2254 ntBASIC15.26■□□□□ 0.03
RARAP10276 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.26■□□□□ 0.03
RARAP10276 AC026954.1-201ENST00000429771 1293 ntBASIC15.26■□□□□ 0.03
RARAP10276 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 CNN2P10-201ENST00000443067 918 ntBASIC15.26■□□□□ 0.03
RARAP10276 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.26■□□□□ 0.03
RARAP10276 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.26■□□□□ 0.03
RARAP10276 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.26■□□□□ 0.03
RARAP10276 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 AC008825.2-201ENST00000603374 718 ntBASIC15.26■□□□□ 0.03
RARAP10276 AC027601.3-201ENST00000622907 509 ntBASIC15.26■□□□□ 0.03
RARAP10276 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
RARAP10276 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.25■□□□□ 0.03
RARAP10276 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.25■□□□□ 0.03
RARAP10276 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 AC112492.5-201ENST00000421897 457 ntBASIC15.25■□□□□ 0.03
RARAP10276 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.25■□□□□ 0.03
RARAP10276 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.25■□□□□ 0.03
RARAP10276 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.25■□□□□ 0.03
RARAP10276 KRT17P8-201ENST00000540749 863 ntBASIC15.25■□□□□ 0.03
RARAP10276 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.25■□□□□ 0.03
RARAP10276 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.25■□□□□ 0.03
RARAP10276 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.25■□□□□ 0.03
RARAP10276 AL512343.1-201ENST00000605837 169 ntBASIC15.25■□□□□ 0.03
RARAP10276 AC244517.3-201ENST00000616254 1235 ntBASIC15.25■□□□□ 0.03
RARAP10276 AL162274.1-201ENST00000617191 1098 ntBASIC15.25■□□□□ 0.03
RARAP10276 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.25■□□□□ 0.03
RARAP10276 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RARAP10276 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 NUTM2HP-201ENST00000442076 2498 ntBASIC15.25■□□□□ 0.03
RARAP10276 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.25■□□□□ 0.03
RARAP10276 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
RARAP10276 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RARAP10276 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RARAP10276 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms