Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.63□□□□□ -0.07
RETP07949 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.63□□□□□ -0.07
RETP07949 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.63□□□□□ -0.07
RETP07949 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.63□□□□□ -0.07
RETP07949 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.63□□□□□ -0.07
RETP07949 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.63□□□□□ -0.07
RETP07949 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RETP07949 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.63□□□□□ -0.07
RETP07949 AL354861.1-201ENST00000445213 355 ntBASIC14.63□□□□□ -0.07
RETP07949 AC004837.1-201ENST00000446267 564 ntBASIC14.63□□□□□ -0.07
RETP07949 RPSAP15-201ENST00000448168 861 ntBASIC14.63□□□□□ -0.07
RETP07949 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.63□□□□□ -0.07
RETP07949 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.63□□□□□ -0.07
RETP07949 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.63□□□□□ -0.07
RETP07949 MIR4472-1-201ENST00000584349 80 ntBASIC14.63□□□□□ -0.07
RETP07949 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.63□□□□□ -0.07
RETP07949 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.63□□□□□ -0.07
RETP07949 AC011247.3-201ENST00000603297 438 ntBASIC14.63□□□□□ -0.07
RETP07949 AC009560.1-201ENST00000620208 434 ntBASIC14.63□□□□□ -0.07
RETP07949 AC073592.2-201ENST00000623062 780 ntBASIC14.63□□□□□ -0.07
RETP07949 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.63□□□□□ -0.07
RETP07949 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.63□□□□□ -0.07
RETP07949 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.63□□□□□ -0.07
RETP07949 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.63□□□□□ -0.07
RETP07949 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RETP07949 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
RETP07949 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.63□□□□□ -0.07
RETP07949 AL365209.1-201ENST00000624418 6473 ntBASIC14.63□□□□□ -0.07
RETP07949 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.63□□□□□ -0.07
RETP07949 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.63□□□□□ -0.07
RETP07949 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RETP07949 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.62□□□□□ -0.07
RETP07949 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RETP07949 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RETP07949 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 OR2I1P-210ENST00000642037 4691 ntBASIC14.62□□□□□ -0.07
RETP07949 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.62□□□□□ -0.07
RETP07949 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.62□□□□□ -0.07
RETP07949 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.62□□□□□ -0.07
RETP07949 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RETP07949 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RETP07949 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
RETP07949 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.62□□□□□ -0.07
RETP07949 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.62□□□□□ -0.07
RETP07949 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.62□□□□□ -0.07
RETP07949 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 AC084752.1-201ENST00000509766 622 ntBASIC14.62□□□□□ -0.07
RETP07949 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.62□□□□□ -0.07
RETP07949 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RETP07949 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.62□□□□□ -0.07
RETP07949 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.62□□□□□ -0.07
RETP07949 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.62□□□□□ -0.07
RETP07949 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.62□□□□□ -0.07
RETP07949 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.62□□□□□ -0.07
RETP07949 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.62□□□□□ -0.07
RETP07949 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.62□□□□□ -0.07
RETP07949 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RETP07949 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RETP07949 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RETP07949 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.62□□□□□ -0.07
RETP07949 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 CICP11-201ENST00000434745 2827 ntBASIC14.62□□□□□ -0.07
RETP07949 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RETP07949 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms