Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GAPDHP04406 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.23□□□□□ -0.45
GAPDHP04406 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
GAPDHP04406 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.23□□□□□ -0.45
GAPDHP04406 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
GAPDHP04406 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
GAPDHP04406 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GAPDHP04406 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
GAPDHP04406 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GAPDHP04406 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GAPDHP04406 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
GAPDHP04406 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
GAPDHP04406 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.23□□□□□ -0.45
GAPDHP04406 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 AL139385.1-201ENST00000611744 3272 ntBASIC12.22□□□□□ -0.45
GAPDHP04406 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.22□□□□□ -0.45
GAPDHP04406 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
GAPDHP04406 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
GAPDHP04406 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.22□□□□□ -0.45
GAPDHP04406 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.22□□□□□ -0.45
GAPDHP04406 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 EIF3FP3-201ENST00000434851 1086 ntBASIC12.22□□□□□ -0.45
GAPDHP04406 KRT17P7-201ENST00000451704 1104 ntBASIC12.22□□□□□ -0.45
GAPDHP04406 COX20P2-201ENST00000452636 358 ntBASIC12.22□□□□□ -0.45
GAPDHP04406 INE1-201ENST00000456273 945 ntBASIC12.22□□□□□ -0.45
GAPDHP04406 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.22□□□□□ -0.45
GAPDHP04406 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
GAPDHP04406 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 AC145423.3-201ENST00000615987 467 ntBASIC12.22□□□□□ -0.45
GAPDHP04406 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 AC019294.4-201ENST00000561777 2905 ntBASIC12.22□□□□□ -0.45
GAPDHP04406 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.22□□□□□ -0.45
GAPDHP04406 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.22□□□□□ -0.45
GAPDHP04406 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
GAPDHP04406 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAPDHP04406 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
GAPDHP04406 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.21□□□□□ -0.45
GAPDHP04406 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
GAPDHP04406 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.21□□□□□ -0.45
GAPDHP04406 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms