Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TRGV3P03979 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.49□□□□□ -0.57
TRGV3P03979 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TRGV3P03979 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TRGV3P03979 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 MYADML-201ENST00000474610 2147 ntBASIC11.48□□□□□ -0.57
TRGV3P03979 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 AC006504.5-208ENST00000588784 2401 ntBASIC11.48□□□□□ -0.57
TRGV3P03979 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.48□□□□□ -0.57
TRGV3P03979 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TRGV3P03979 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TRGV3P03979 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TRGV3P03979 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 AC010141.1-201ENST00000411585 623 ntBASIC11.48□□□□□ -0.57
TRGV3P03979 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.48□□□□□ -0.57
TRGV3P03979 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.48□□□□□ -0.57
TRGV3P03979 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.48□□□□□ -0.57
TRGV3P03979 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 AL583810.1-201ENST00000553344 1045 ntBASIC11.48□□□□□ -0.57
TRGV3P03979 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 DUX4L46-201ENST00000566845 751 ntBASIC11.48□□□□□ -0.57
TRGV3P03979 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.48□□□□□ -0.57
TRGV3P03979 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 E2F3P2-201ENST00000447755 1422 ntBASIC11.48□□□□□ -0.57
TRGV3P03979 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
TRGV3P03979 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.48□□□□□ -0.57
TRGV3P03979 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TRGV3P03979 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TRGV3P03979 AC097359.2-201ENST00000604992 2389 ntBASIC11.48□□□□□ -0.57
TRGV3P03979 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TRGV3P03979 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.47□□□□□ -0.57
TRGV3P03979 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 AC009093.10-201ENST00000641956 1442 ntBASIC11.47□□□□□ -0.57
TRGV3P03979 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.47□□□□□ -0.57
TRGV3P03979 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRGV3P03979 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms