Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 TSPY22P-201ENST00000427496 604 ntBASIC11.6□□□□□ -0.55
APOC3P02656 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
APOC3P02656 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.6□□□□□ -0.55
APOC3P02656 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 AL162430.1-201ENST00000480705 870 ntBASIC11.6□□□□□ -0.55
APOC3P02656 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 AC096582.2-201ENST00000510860 516 ntBASIC11.6□□□□□ -0.55
APOC3P02656 DLX3-202ENST00000512495 834 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 AL031432.5-201ENST00000641059 760 ntBASIC11.6□□□□□ -0.55
APOC3P02656 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.6□□□□□ -0.55
APOC3P02656 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 KIF28P-202ENST00000504864 3064 ntBASIC11.6□□□□□ -0.55
APOC3P02656 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
APOC3P02656 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOC3P02656 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
APOC3P02656 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
APOC3P02656 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 CTAGE10P-201ENST00000318353 2408 ntBASIC11.59□□□□□ -0.55
APOC3P02656 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.59□□□□□ -0.55
APOC3P02656 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 ABCD1P5-201ENST00000445663 754 ntBASIC11.59□□□□□ -0.55
APOC3P02656 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 AC128676.1-201ENST00000454392 318 ntBASIC11.59□□□□□ -0.55
APOC3P02656 ADM-205ENST00000528544 586 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.59□□□□□ -0.55
APOC3P02656 AC024267.1-201ENST00000582320 895 ntBASIC11.59□□□□□ -0.55
APOC3P02656 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 AL022326.1-202ENST00000641533 845 ntBASIC11.59□□□□□ -0.55
APOC3P02656 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
APOC3P02656 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
APOC3P02656 KRT8P35-201ENST00000483942 1338 ntBASIC11.59□□□□□ -0.55
APOC3P02656 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOC3P02656 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
APOC3P02656 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
APOC3P02656 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.58□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms