Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AP006288.1-201ENST00000446065 395 ntBASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AC092337.1-201ENST00000568699 1129 ntBASIC12.55□□□□□ -0.4
HLA-DQB1P01920 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AC064801.2-201ENST00000625052 1303 ntBASIC12.55□□□□□ -0.4
HLA-DQB1P01920 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DQB1P01920 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AL022313.4-201ENST00000562756 2046 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AL021155.1-201ENST00000438808 2637 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 CNN2P2-201ENST00000443536 909 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 CNN2P3-201ENST00000450201 906 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AC022616.1-201ENST00000518688 554 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AC044860.1-202ENST00000559481 777 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AC027612.4-201ENST00000605371 583 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AL136317.3-201ENST00000618497 906 ntBASIC12.54□□□□□ -0.4
HLA-DQB1P01920 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms