Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD4O95243 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD4O95243 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MBD4O95243 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MBD4O95243 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD4O95243 AL022313.4-201ENST00000562756 2046 ntBASIC17.23■□□□□ 0.35
MBD4O95243 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MBD4O95243 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD4O95243 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
MBD4O95243 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD4O95243 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
MBD4O95243 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 DUX4L50-201ENST00000455245 715 ntBASIC17.22■□□□□ 0.35
MBD4O95243 RN7SL769P-201ENST00000469386 295 ntBASIC17.22■□□□□ 0.35
MBD4O95243 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.22■□□□□ 0.35
MBD4O95243 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.22■□□□□ 0.35
MBD4O95243 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MBD4O95243 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD4O95243 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
MBD4O95243 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MBD4O95243 AC023908.3-201ENST00000564211 3047 ntBASIC17.21■□□□□ 0.35
MBD4O95243 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MBD4O95243 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 AC007191.1-201ENST00000623179 2995 ntBASIC17.21■□□□□ 0.35
MBD4O95243 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD4O95243 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
MBD4O95243 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD4O95243 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD4O95243 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.21■□□□□ 0.35
MBD4O95243 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD4O95243 PHBP15-201ENST00000574228 665 ntBASIC17.21■□□□□ 0.35
MBD4O95243 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
MBD4O95243 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
MBD4O95243 AC106872.11-201ENST00000605838 421 ntBASIC17.21■□□□□ 0.35
MBD4O95243 LINC01783-202ENST00000614408 828 ntBASIC17.21■□□□□ 0.35
MBD4O95243 BX284668.2-205ENST00000619677 828 ntBASIC17.21■□□□□ 0.35
MBD4O95243 AC007718.1-201ENST00000621078 280 ntBASIC17.21■□□□□ 0.35
MBD4O95243 AC015967.2-201ENST00000624092 234 ntBASIC17.21■□□□□ 0.35
MBD4O95243 AC006435.4-201ENST00000625037 234 ntBASIC17.21■□□□□ 0.35
MBD4O95243 AL356737.1-201ENST00000634391 234 ntBASIC17.21■□□□□ 0.35
MBD4O95243 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD4O95243 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD4O95243 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.21■□□□□ 0.34
MBD4O95243 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.21■□□□□ 0.34
MBD4O95243 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.21■□□□□ 0.34
MBD4O95243 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD4O95243 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD4O95243 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD4O95243 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD4O95243 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MBD4O95243 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD4O95243 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD4O95243 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD4O95243 KRT8P19-201ENST00000551916 1455 ntBASIC17.2■□□□□ 0.34
MBD4O95243 AC020910.6-201ENST00000623084 1459 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms