Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SEPHS2P1-201ENST00000511618 1162 ntBASIC18.59■□□□□ 0.57
LTN1O94822 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC18.59■□□□□ 0.57
LTN1O94822 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 CICP16-201ENST00000502609 2813 ntBASIC18.59■□□□□ 0.57
LTN1O94822 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 AC089987.1-201ENST00000551654 2209 ntBASIC18.59■□□□□ 0.57
LTN1O94822 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LTN1O94822 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC18.59■□□□□ 0.57
LTN1O94822 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
LTN1O94822 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTN1O94822 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LTN1O94822 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTN1O94822 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTN1O94822 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTN1O94822 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
LTN1O94822 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC18.58■□□□□ 0.57
LTN1O94822 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC18.58■□□□□ 0.57
LTN1O94822 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 ANKRD26P1-203ENST00000569528 966 ntBASIC18.58■□□□□ 0.57
LTN1O94822 AC132812.1-201ENST00000583145 892 ntBASIC18.58■□□□□ 0.57
LTN1O94822 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LTN1O94822 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC18.58■□□□□ 0.57
LTN1O94822 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
LTN1O94822 AC010531.8-201ENST00000623341 685 ntBASIC18.58■□□□□ 0.57
LTN1O94822 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.58■□□□□ 0.57
LTN1O94822 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
LTN1O94822 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTN1O94822 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTN1O94822 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC18.58■□□□□ 0.57
LTN1O94822 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LTN1O94822 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.58■□□□□ 0.57
LTN1O94822 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LTN1O94822 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LTN1O94822 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LTN1O94822 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LTN1O94822 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LTN1O94822 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.58■□□□□ 0.56
LTN1O94822 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 UROS-201ENST00000368774 744 ntTSL 2 BASIC18.58■□□□□ 0.56
LTN1O94822 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LTN1O94822 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LTN1O94822 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.58■□□□□ 0.56
LTN1O94822 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.58■□□□□ 0.56
LTN1O94822 MIR4326-201ENST00000582203 59 ntBASIC18.58■□□□□ 0.56
LTN1O94822 AC005777.1-201ENST00000588332 187 ntBASIC18.58■□□□□ 0.56
LTN1O94822 KF455155.1-201ENST00000604493 303 ntBASIC18.58■□□□□ 0.56
LTN1O94822 AL627230.2-201ENST00000613254 655 ntBASIC18.58■□□□□ 0.56
LTN1O94822 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTN1O94822 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.57■□□□□ 0.56
LTN1O94822 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LTN1O94822 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LTN1O94822 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.57■□□□□ 0.56
LTN1O94822 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
LTN1O94822 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.57■□□□□ 0.56
LTN1O94822 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.57■□□□□ 0.56
LTN1O94822 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.57■□□□□ 0.56
LTN1O94822 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC18.57■□□□□ 0.56
LTN1O94822 MME-218ENST00000625667 363 ntTSL 5 BASIC18.57■□□□□ 0.56
LTN1O94822 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 BX322534.1-201ENST00000635574 241 ntBASIC18.57■□□□□ 0.56
LTN1O94822 AC215524.1-201ENST00000635696 241 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms