Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 AP006294.1-201ENST00000415407 339 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 HMGN1P19-201ENST00000436976 333 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 AL355864.2-201ENST00000447420 863 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN2BO60939 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN2BO60939 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 SLC25A47P1-201ENST00000531577 414 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN2BO60939 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SCN2BO60939 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN2BO60939 AC008825.2-201ENST00000603374 718 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 AL358472.3-201ENST00000608147 415 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.78□□□□□ -0.2
SCN2BO60939 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN2BO60939 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN2BO60939 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SCN2BO60939 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN2BO60939 AL359183.1-201ENST00000623796 2132 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 AC072061.1-201ENST00000569710 2234 ntBASIC13.78□□□□□ -0.2
SCN2BO60939 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SCN2BO60939 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCN2BO60939 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCN2BO60939 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.77□□□□□ -0.2
SCN2BO60939 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCN2BO60939 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SCN2BO60939 AC098614.1-201ENST00000368528 745 ntBASIC13.77□□□□□ -0.21
SCN2BO60939 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SCN2BO60939 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN2BO60939 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 CNN2P8-201ENST00000421872 913 ntBASIC13.77□□□□□ -0.21
SCN2BO60939 FAM197Y7-201ENST00000432892 766 ntBASIC13.77□□□□□ -0.21
SCN2BO60939 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.77□□□□□ -0.21
SCN2BO60939 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCN2BO60939 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms