Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IDH3BO43837 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IDH3BO43837 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IDH3BO43837 C1QBPP1-201ENST00000400117 770 ntBASIC13.46□□□□□ -0.25
IDH3BO43837 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IDH3BO43837 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.46□□□□□ -0.25
IDH3BO43837 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.46□□□□□ -0.25
IDH3BO43837 AC055876.2-201ENST00000531834 546 ntBASIC13.46□□□□□ -0.25
IDH3BO43837 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IDH3BO43837 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.46□□□□□ -0.25
IDH3BO43837 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.46□□□□□ -0.25
IDH3BO43837 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IDH3BO43837 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.46□□□□□ -0.25
IDH3BO43837 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 AC114271.1-201ENST00000612689 2813 ntBASIC13.46□□□□□ -0.25
IDH3BO43837 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.46□□□□□ -0.25
IDH3BO43837 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
IDH3BO43837 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IDH3BO43837 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.46□□□□□ -0.26
IDH3BO43837 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.46□□□□□ -0.26
IDH3BO43837 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
IDH3BO43837 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IDH3BO43837 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
IDH3BO43837 KRT8P22-201ENST00000562317 1415 ntBASIC13.46□□□□□ -0.26
IDH3BO43837 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.46□□□□□ -0.26
IDH3BO43837 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.46□□□□□ -0.26
IDH3BO43837 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
IDH3BO43837 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
IDH3BO43837 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
IDH3BO43837 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
IDH3BO43837 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
IDH3BO43837 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
IDH3BO43837 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.45□□□□□ -0.26
IDH3BO43837 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IDH3BO43837 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.45□□□□□ -0.26
IDH3BO43837 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.45□□□□□ -0.26
IDH3BO43837 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.45□□□□□ -0.26
IDH3BO43837 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 AC007969.1-201ENST00000433675 447 ntBASIC13.45□□□□□ -0.26
IDH3BO43837 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.45□□□□□ -0.26
IDH3BO43837 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.45□□□□□ -0.26
IDH3BO43837 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.45□□□□□ -0.26
IDH3BO43837 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.45□□□□□ -0.26
IDH3BO43837 AC023511.2-201ENST00000618803 211 ntBASIC13.45□□□□□ -0.26
IDH3BO43837 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.45□□□□□ -0.26
IDH3BO43837 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 AC004241.5-201ENST00000623870 2448 ntBASIC13.45□□□□□ -0.26
IDH3BO43837 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IDH3BO43837 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
IDH3BO43837 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IDH3BO43837 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IDH3BO43837 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.44□□□□□ -0.26
IDH3BO43837 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IDH3BO43837 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
IDH3BO43837 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IDH3BO43837 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IDH3BO43837 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.44□□□□□ -0.26
IDH3BO43837 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IDH3BO43837 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IDH3BO43837 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IDH3BO43837 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms