Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AC087386.2-201ENST00000623212 4637 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 TUBB1P2-201ENST00000422712 1306 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 TUBB1P1-201ENST00000503144 1300 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 BTBD6P1-201ENST00000412176 1267 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 ST13P19-201ENST00000442505 1124 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AC006122.1-201ENST00000493323 440 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AL160314.3-201ENST00000556041 767 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAF3IP2O43734 AC144522.1-201ENST00000625111 1658 ntBASIC12.93□□□□□ -0.34
TRAF3IP2O43734 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAF3IP2O43734 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms