Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
UPK2O00526 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 FAM197Y7-201ENST00000432892 766 ntBASIC11.67□□□□□ -0.54
UPK2O00526 BCRP2-202ENST00000447763 634 ntBASIC11.67□□□□□ -0.54
UPK2O00526 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 BCRP6-201ENST00000510112 632 ntBASIC11.67□□□□□ -0.54
UPK2O00526 BCRP7-201ENST00000511549 544 ntBASIC11.67□□□□□ -0.54
UPK2O00526 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.67□□□□□ -0.54
UPK2O00526 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 RN7SL713P-201ENST00000582127 302 ntBASIC11.67□□□□□ -0.54
UPK2O00526 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.67□□□□□ -0.54
UPK2O00526 AL022328.1-201ENST00000610050 478 ntBASIC11.67□□□□□ -0.54
UPK2O00526 AC006453.4-201ENST00000636949 1252 ntBASIC11.67□□□□□ -0.54
UPK2O00526 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 AGAP10P-201ENST00000454844 2418 ntBASIC11.67□□□□□ -0.54
UPK2O00526 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.67□□□□□ -0.54
UPK2O00526 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
UPK2O00526 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
UPK2O00526 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 AL354989.2-201ENST00000435838 1540 ntBASIC11.66□□□□□ -0.54
UPK2O00526 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 AL136309.1-201ENST00000403917 691 ntBASIC11.66□□□□□ -0.54
UPK2O00526 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.66□□□□□ -0.54
UPK2O00526 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 AC016694.1-201ENST00000434179 700 ntBASIC11.66□□□□□ -0.54
UPK2O00526 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms