Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00473A8K010 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 TMEM14DP-201ENST00000422205 345 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 AL035414.1-201ENST00000451327 857 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 COX5BP1-201ENST00000507622 393 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.83□□□□□ -0.52
LINC00473A8K010 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00473A8K010 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00473A8K010 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00473A8K010 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
LINC00473A8K010 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
LINC00473A8K010 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00473A8K010 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 AC008735.3-201ENST00000596646 500 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 AC233724.13-201ENST00000598383 410 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00473A8K010 AL022328.1-201ENST00000610050 478 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 AC025048.6-201ENST00000634326 1161 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 AC006453.4-201ENST00000636949 1252 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 PPT1-213ENST00000641319 2388 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC00473A8K010 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC00473A8K010 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 AL136309.1-201ENST00000403917 691 ntBASIC11.82□□□□□ -0.52
LINC00473A8K010 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00473A8K010 AC016694.1-201ENST00000434179 700 ntBASIC11.82□□□□□ -0.52
LINC00473A8K010 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00473A8K010 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00473A8K010 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.82□□□□□ -0.52
LINC00473A8K010 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.82□□□□□ -0.52
LINC00473A8K010 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00473A8K010 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00473A8K010 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC00473A8K010 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 AC138951.2-201ENST00000623455 1161 ntBASIC11.82□□□□□ -0.52
LINC00473A8K010 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms