Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 RPL13AP3-202ENST00000494676 1473 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 LINC00265-2P-201ENST00000413372 782 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 AL354861.1-201ENST00000445213 355 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CHCHD2P2-201ENST00000503744 321 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 TMCO5B-205ENST00000530020 894 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 AP000911.2-201ENST00000534330 502 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 AP000322.3-201ENST00000608665 388 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 AL021707.6-201ENST00000609212 491 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CICP24-201ENST00000605464 2705 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 AC067931.2-201ENST00000623655 2003 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L3A6NE82 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 SHMT1P1-201ENST00000419974 1312 ntBASIC12.62□□□□□ -0.39
MBD3L3A6NE82 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AC092638.2-201ENST00000441105 947 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 KRT18P15-201ENST00000458108 1291 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AC005740.1-201ENST00000515639 522 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 OR5BD1P-201ENST00000532527 817 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 HERC2P11-201ENST00000562845 725 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AC100756.2-201ENST00000569537 736 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 RN7SL470P-201ENST00000583069 259 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 MIR4750-201ENST00000584564 56 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AC107464.3-201ENST00000609172 737 ntBASIC12.61□□□□□ -0.39
MBD3L3A6NE82 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MBD3L3A6NE82 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.6□□□□□ -0.39
MBD3L3A6NE82 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms