Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HCFC2Q9Y5Z7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.97■■□□□ 1.43
HCFC2Q9Y5Z7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HCFC2Q9Y5Z7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 KRT18P5-201ENST00000436075 1291 ntBASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HCFC2Q9Y5Z7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.95■■□□□ 1.43
HCFC2Q9Y5Z7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.95■■□□□ 1.43
HCFC2Q9Y5Z7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 TSPY26P-201ENST00000476365 1326 ntBASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.95■■□□□ 1.42
HCFC2Q9Y5Z7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HCFC2Q9Y5Z7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.93■■□□□ 1.42
HCFC2Q9Y5Z7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4L2-201ENST00000561772 1275 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 AL137784.2-201ENST00000607332 1000 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4L6-201ENST00000626483 1275 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4L1-201ENST00000627662 1275 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4L8-201ENST00000629013 1275 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4L3-201ENST00000630187 1275 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4L7-201ENST00000630678 1275 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 DUX4L5-201ENST00000630834 1275 ntBASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
HCFC2Q9Y5Z7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 SLC47A1P1-202ENST00000449666 945 ntBASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 DUSP8P4-201ENST00000399538 1761 ntBASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
HCFC2Q9Y5Z7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 AC092437.1-201ENST00000624794 1048 ntBASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HCFC2Q9Y5Z7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HCFC2Q9Y5Z7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HCFC2Q9Y5Z7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
HCFC2Q9Y5Z7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms