Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 AC004812.2-201ENST00000611079 2094 ntBASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.9■□□□□ 0.94
HRH3Q9Y5N1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HRH3Q9Y5N1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HRH3Q9Y5N1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HRH3Q9Y5N1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HRH3Q9Y5N1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.89■□□□□ 0.93
HRH3Q9Y5N1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.89■□□□□ 0.93
HRH3Q9Y5N1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HRH3Q9Y5N1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HRH3Q9Y5N1 LINC00543-201ENST00000567234 1845 ntBASIC20.88■□□□□ 0.93
HRH3Q9Y5N1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.88■□□□□ 0.93
HRH3Q9Y5N1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.88■□□□□ 0.93
HRH3Q9Y5N1 MIR6722-201ENST00000617286 78 ntBASIC20.88■□□□□ 0.93
HRH3Q9Y5N1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HRH3Q9Y5N1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 AC096631.2-201ENST00000436136 790 ntBASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HRH3Q9Y5N1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HRH3Q9Y5N1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HRH3Q9Y5N1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HRH3Q9Y5N1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 AC005837.3-201ENST00000612163 286 ntBASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HRH3Q9Y5N1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HRH3Q9Y5N1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HRH3Q9Y5N1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HRH3Q9Y5N1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HRH3Q9Y5N1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HRH3Q9Y5N1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HRH3Q9Y5N1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.81■□□□□ 0.92
HRH3Q9Y5N1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.81■□□□□ 0.92
HRH3Q9Y5N1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HRH3Q9Y5N1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.81■□□□□ 0.92
HRH3Q9Y5N1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.81■□□□□ 0.92
HRH3Q9Y5N1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.81■□□□□ 0.92
HRH3Q9Y5N1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms