Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 GPX1-201ENST00000419349 1106 ntBASIC20.73■□□□□ 0.91
PCDHGB1Q9Y5G3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB1Q9Y5G3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGB1Q9Y5G3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB1Q9Y5G3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 RP9P-202ENST00000450133 1212 ntBASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB1Q9Y5G3 AC242852.2-201ENST00000615738 1807 ntBASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB1Q9Y5G3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
PCDHGB1Q9Y5G3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHGB1Q9Y5G3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB1Q9Y5G3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 ECEL1P2-201ENST00000461596 1295 ntBASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 AC092296.2-201ENST00000589470 999 ntBASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB1Q9Y5G3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB1Q9Y5G3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGB1Q9Y5G3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 RNF126P1-201ENST00000567452 1320 ntBASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 AL137060.1-201ENST00000618151 2648 ntBASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB1Q9Y5G3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB1Q9Y5G3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms