Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL137060.1-201ENST00000618151 2648 ntBASIC21.41■■□□□ 1.02
AP4S1Q9Y587 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
AP4S1Q9Y587 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
AP4S1Q9Y587 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
AP4S1Q9Y587 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP4S1Q9Y587 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP4S1Q9Y587 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP4S1Q9Y587 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
AP4S1Q9Y587 SMPD5-203ENST00000639008 1464 ntBASIC21.39■■□□□ 1.01
AP4S1Q9Y587 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
AP4S1Q9Y587 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.37■■□□□ 1.01
AP4S1Q9Y587 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 ESRRAP2-201ENST00000418437 1549 ntBASIC21.36■■□□□ 1.01
AP4S1Q9Y587 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
AP4S1Q9Y587 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 AL161729.1-201ENST00000604104 1402 ntBASIC21.35■■□□□ 1.01
AP4S1Q9Y587 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
AP4S1Q9Y587 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
AP4S1Q9Y587 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP4S1Q9Y587 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
AP4S1Q9Y587 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
AP4S1Q9Y587 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
AP4S1Q9Y587 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms