Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC131274.2-201ENST00000580697 1507 ntBASIC21.1■□□□□ 0.97
RLIMQ9NVW2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 AL117328.2-201ENST00000624617 1940 ntBASIC21.1■□□□□ 0.97
RLIMQ9NVW2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 ANOS2P-203ENST00000472227 1816 ntBASIC21.1■□□□□ 0.97
RLIMQ9NVW2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RLIMQ9NVW2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RLIMQ9NVW2 CLDN5-201ENST00000403084 2357 ntBASIC21.09■□□□□ 0.97
RLIMQ9NVW2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RLIMQ9NVW2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RLIMQ9NVW2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RLIMQ9NVW2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.09■□□□□ 0.97
RLIMQ9NVW2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.09■□□□□ 0.97
RLIMQ9NVW2 AL161729.1-201ENST00000604104 1402 ntBASIC21.09■□□□□ 0.97
RLIMQ9NVW2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 KRT18P24-201ENST00000344739 1156 ntBASIC21.08■□□□□ 0.97
RLIMQ9NVW2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RLIMQ9NVW2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RLIMQ9NVW2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RLIMQ9NVW2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RLIMQ9NVW2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.08■□□□□ 0.96
RLIMQ9NVW2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 THA1P-201ENST00000590384 1145 ntBASIC21.07■□□□□ 0.96
RLIMQ9NVW2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 AC233723.2-201ENST00000623798 2106 ntBASIC21.07■□□□□ 0.96
RLIMQ9NVW2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RLIMQ9NVW2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 EP400NL-214ENST00000641289 2402 ntBASIC21.06■□□□□ 0.96
RLIMQ9NVW2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 AC103834.1-201ENST00000520383 144 ntBASIC21.06■□□□□ 0.96
RLIMQ9NVW2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.06■□□□□ 0.96
RLIMQ9NVW2 AF131216.4-201ENST00000638924 1588 ntBASIC21.06■□□□□ 0.96
RLIMQ9NVW2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RLIMQ9NVW2 KRT8P33-201ENST00000508125 1423 ntBASIC21.05■□□□□ 0.96
RLIMQ9NVW2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.05■□□□□ 0.96
RLIMQ9NVW2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.05■□□□□ 0.96
RLIMQ9NVW2 MIR4281-201ENST00000580852 62 ntBASIC21.05■□□□□ 0.96
RLIMQ9NVW2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.05■□□□□ 0.96
RLIMQ9NVW2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.05■□□□□ 0.96
RLIMQ9NVW2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RLIMQ9NVW2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RLIMQ9NVW2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 MIR4508-201ENST00000584178 70 ntBASIC21.04■□□□□ 0.96
RLIMQ9NVW2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.04■□□□□ 0.96
RLIMQ9NVW2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RLIMQ9NVW2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms