Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF304Q9HCX3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 AL139246.5-201ENST00000606645 996 ntBASIC21.48■■□□□ 1.03
ZNF304Q9HCX3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 AC096631.2-201ENST00000436136 790 ntBASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 AC009102.2-201ENST00000606772 1639 ntBASIC21.47■■□□□ 1.03
ZNF304Q9HCX3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF304Q9HCX3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 AC141586.4-201ENST00000624558 1573 ntBASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
ZNF304Q9HCX3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 LINC01124-201ENST00000409786 2117 ntBASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF304Q9HCX3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 AC110285.6-201ENST00000617652 491 ntBASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.43■■□□□ 1.02
ZNF304Q9HCX3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 LINC00543-201ENST00000567234 1845 ntBASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 AL139125.2-201ENST00000623134 1869 ntBASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF304Q9HCX3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 AC092171.4-201ENST00000609130 632 ntBASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF304Q9HCX3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 UNC93B3-201ENST00000308076 687 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms