Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD248Q9HCU0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CD248Q9HCU0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CD248Q9HCU0 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.66■■□□□ 1.38
CD248Q9HCU0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.66■■□□□ 1.38
CD248Q9HCU0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.66■■□□□ 1.38
CD248Q9HCU0 SNX5-217ENST00000606557 1087 ntBASIC23.66■■□□□ 1.38
CD248Q9HCU0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CD248Q9HCU0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD248Q9HCU0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.66■■□□□ 1.38
CD248Q9HCU0 AC097639.1-201ENST00000565519 1891 ntBASIC23.66■■□□□ 1.38
CD248Q9HCU0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD248Q9HCU0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CD248Q9HCU0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CD248Q9HCU0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.65■■□□□ 1.38
CD248Q9HCU0 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.65■■□□□ 1.38
CD248Q9HCU0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.65■■□□□ 1.38
CD248Q9HCU0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CD248Q9HCU0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CD248Q9HCU0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CD248Q9HCU0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD248Q9HCU0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
CD248Q9HCU0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.63■■□□□ 1.37
CD248Q9HCU0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD248Q9HCU0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.63■■□□□ 1.37
CD248Q9HCU0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CD248Q9HCU0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.62■■□□□ 1.37
CD248Q9HCU0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.62■■□□□ 1.37
CD248Q9HCU0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.62■■□□□ 1.37
CD248Q9HCU0 MIR935-201ENST00000401179 91 ntBASIC23.62■■□□□ 1.37
CD248Q9HCU0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.62■■□□□ 1.37
CD248Q9HCU0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.62■■□□□ 1.37
CD248Q9HCU0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD248Q9HCU0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD248Q9HCU0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD248Q9HCU0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CD248Q9HCU0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD248Q9HCU0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CD248Q9HCU0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.62■■□□□ 1.37
CD248Q9HCU0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD248Q9HCU0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.61■■□□□ 1.37
CD248Q9HCU0 MIR6722-201ENST00000617286 78 ntBASIC23.61■■□□□ 1.37
CD248Q9HCU0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD248Q9HCU0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD248Q9HCU0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD248Q9HCU0 AC010501.1-201ENST00000606270 1962 ntBASIC23.6■■□□□ 1.37
CD248Q9HCU0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD248Q9HCU0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD248Q9HCU0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.6■■□□□ 1.37
CD248Q9HCU0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD248Q9HCU0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CD248Q9HCU0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.6■■□□□ 1.37
CD248Q9HCU0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.6■■□□□ 1.37
CD248Q9HCU0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
CD248Q9HCU0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD248Q9HCU0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD248Q9HCU0 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.59■■□□□ 1.37
CD248Q9HCU0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.59■■□□□ 1.37
CD248Q9HCU0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.59■■□□□ 1.37
CD248Q9HCU0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.59■■□□□ 1.37
CD248Q9HCU0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.59■■□□□ 1.37
CD248Q9HCU0 AC022211.4-201ENST00000625094 2161 ntBASIC23.59■■□□□ 1.37
CD248Q9HCU0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD248Q9HCU0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CD248Q9HCU0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CD248Q9HCU0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.58■■□□□ 1.37
CD248Q9HCU0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD248Q9HCU0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD248Q9HCU0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD248Q9HCU0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CD248Q9HCU0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CD248Q9HCU0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CD248Q9HCU0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CD248Q9HCU0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD248Q9HCU0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CD248Q9HCU0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.57■■□□□ 1.36
CD248Q9HCU0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 AC096631.2-201ENST00000436136 790 ntBASIC23.57■■□□□ 1.36
CD248Q9HCU0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CD248Q9HCU0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.57■■□□□ 1.36
CD248Q9HCU0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.57■■□□□ 1.36
CD248Q9HCU0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD248Q9HCU0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD248Q9HCU0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
CD248Q9HCU0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD248Q9HCU0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD248Q9HCU0 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.56■■□□□ 1.36
CD248Q9HCU0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD248Q9HCU0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD248Q9HCU0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CD248Q9HCU0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CD248Q9HCU0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.55■■□□□ 1.36
CD248Q9HCU0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms