Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 MIR4281-201ENST00000580852 62 ntBASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM1Q9HBL6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 AF131216.4-201ENST00000638924 1588 ntBASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM1Q9HBL6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRTM1Q9HBL6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRTM1Q9HBL6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LRTM1Q9HBL6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
LRTM1Q9HBL6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LRTM1Q9HBL6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.76■■□□□ 1.07
LRTM1Q9HBL6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM1Q9HBL6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM1Q9HBL6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 AC012354.3-201ENST00000623734 483 ntBASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM1Q9HBL6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRTM1Q9HBL6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LRTM1Q9HBL6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms