Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3EQ9H7J1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3EQ9H7J1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PPP1R3EQ9H7J1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3EQ9H7J1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3EQ9H7J1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3EQ9H7J1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.06■□□□□ 0.8
PPP1R3EQ9H7J1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3EQ9H7J1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPP1R3EQ9H7J1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP1R3EQ9H7J1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.04■□□□□ 0.8
PPP1R3EQ9H7J1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.04■□□□□ 0.8
PPP1R3EQ9H7J1 LONRF2P2-201ENST00000439212 571 ntBASIC20.04■□□□□ 0.8
PPP1R3EQ9H7J1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPP1R3EQ9H7J1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP1R3EQ9H7J1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 ANOS2P-203ENST00000472227 1816 ntBASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PPP1R3EQ9H7J1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PPP1R3EQ9H7J1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.02■□□□□ 0.79
PPP1R3EQ9H7J1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
PPP1R3EQ9H7J1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20■□□□□ 0.79
PPP1R3EQ9H7J1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 PVT1_1.1-201ENST00000615125 194 ntBASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP1R3EQ9H7J1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP1R3EQ9H7J1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PPP1R3EQ9H7J1 AL033527.3-201ENST00000566366 1196 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms