Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM38AQ9H6F2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.16■□□□□ 0.98
TMEM38AQ9H6F2 AC120024.1-201ENST00000562672 995 ntBASIC21.16■□□□□ 0.98
TMEM38AQ9H6F2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM38AQ9H6F2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TMEM38AQ9H6F2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TMEM38AQ9H6F2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM38AQ9H6F2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.14■□□□□ 0.98
TMEM38AQ9H6F2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM38AQ9H6F2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM38AQ9H6F2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM38AQ9H6F2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 AC074183.2-201ENST00000623112 922 ntBASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.14■□□□□ 0.97
TMEM38AQ9H6F2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 KRT18P24-201ENST00000344739 1156 ntBASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 AF131216.4-201ENST00000638924 1588 ntBASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM38AQ9H6F2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 C1orf229-201ENST00000623686 2258 ntBASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM38AQ9H6F2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM38AQ9H6F2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM38AQ9H6F2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM38AQ9H6F2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM38AQ9H6F2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM38AQ9H6F2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM38AQ9H6F2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM38AQ9H6F2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 MIR4281-201ENST00000580852 62 ntBASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 BHLHE23-202ENST00000612929 1109 ntBASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM38AQ9H6F2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM38AQ9H6F2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM38AQ9H6F2 ATP5G2P3-201ENST00000429083 425 ntBASIC21.08■□□□□ 0.97
TMEM38AQ9H6F2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM38AQ9H6F2 THA1P-201ENST00000590384 1145 ntBASIC21.08■□□□□ 0.97
TMEM38AQ9H6F2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM38AQ9H6F2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM38AQ9H6F2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM38AQ9H6F2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
TMEM38AQ9H6F2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM38AQ9H6F2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TMEM38AQ9H6F2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM38AQ9H6F2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM38AQ9H6F2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM38AQ9H6F2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms