Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
PTPN23Q9H3S7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
PTPN23Q9H3S7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PTPN23Q9H3S7 AC092171.4-201ENST00000609130 632 ntBASIC34.62■■■■□ 3.13
PTPN23Q9H3S7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC34.62■■■■□ 3.13
PTPN23Q9H3S7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PTPN23Q9H3S7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC34.61■■■■□ 3.13
PTPN23Q9H3S7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
PTPN23Q9H3S7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
PTPN23Q9H3S7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC34.61■■■■□ 3.13
PTPN23Q9H3S7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC34.61■■■■□ 3.13
PTPN23Q9H3S7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC34.61■■■■□ 3.13
PTPN23Q9H3S7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC34.6■■■■□ 3.13
PTPN23Q9H3S7 AL138724.1-201ENST00000606771 1088 ntBASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 AC241377.3-202ENST00000626088 1088 ntBASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 AC241585.3-202ENST00000628937 1088 ntBASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 AC245100.8-202ENST00000629247 1058 ntBASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC34.59■■■■□ 3.13
PTPN23Q9H3S7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
PTPN23Q9H3S7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC34.58■■■■□ 3.13
PTPN23Q9H3S7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
PTPN23Q9H3S7 AC105265.2-201ENST00000467189 838 ntBASIC34.58■■■■□ 3.13
PTPN23Q9H3S7 AL355001.2-201ENST00000620617 1191 ntBASIC34.58■■■■□ 3.13
PTPN23Q9H3S7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
PTPN23Q9H3S7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
PTPN23Q9H3S7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.13
PTPN23Q9H3S7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
PTPN23Q9H3S7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC34.57■■■■□ 3.13
PTPN23Q9H3S7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
PTPN23Q9H3S7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
PTPN23Q9H3S7 AC009086.3-201ENST00000623486 1008 ntBASIC34.57■■■■□ 3.12
PTPN23Q9H3S7 AC136469.2-201ENST00000623944 1028 ntBASIC34.57■■■■□ 3.12
PTPN23Q9H3S7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 EED-207ENST00000528180 1745 ntTSL 5 BASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 RARRES2P6-201ENST00000567333 442 ntBASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 AC135731.1-201ENST00000569415 2548 ntBASIC34.56■■■■□ 3.12
PTPN23Q9H3S7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 AL136967.2-201ENST00000623968 743 ntBASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC34.55■■■■□ 3.12
PTPN23Q9H3S7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
PTPN23Q9H3S7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC34.53■■■■□ 3.12
PTPN23Q9H3S7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
PTPN23Q9H3S7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
PTPN23Q9H3S7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
PTPN23Q9H3S7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
PTPN23Q9H3S7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC34.52■■■■□ 3.12
PTPN23Q9H3S7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
PTPN23Q9H3S7 AC027682.1-201ENST00000562846 899 ntBASIC34.52■■■■□ 3.12
PTPN23Q9H3S7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.51■■■■□ 3.12
PTPN23Q9H3S7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
PTPN23Q9H3S7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
PTPN23Q9H3S7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC34.51■■■■□ 3.11
PTPN23Q9H3S7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
PTPN23Q9H3S7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC34.5■■■■□ 3.11
PTPN23Q9H3S7 MAG-206ENST00000597035 542 ntTSL 4 BASIC34.5■■■■□ 3.11
PTPN23Q9H3S7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
PTPN23Q9H3S7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
PTPN23Q9H3S7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC34.49■■■■□ 3.11
PTPN23Q9H3S7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC34.49■■■■□ 3.11
PTPN23Q9H3S7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC34.49■■■■□ 3.11
PTPN23Q9H3S7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
PTPN23Q9H3S7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
PTPN23Q9H3S7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC34.48■■■■□ 3.11
PTPN23Q9H3S7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
PTPN23Q9H3S7 AC091305.1-201ENST00000479476 895 ntBASIC34.48■■■■□ 3.11
PTPN23Q9H3S7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PTPN23Q9H3S7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PTPN23Q9H3S7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC34.47■■■■□ 3.11
PTPN23Q9H3S7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms