Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 CLDN5-201ENST00000403084 2357 ntBASIC19.41■□□□□ 0.7
NICN1Q9BSH3 AL161729.1-201ENST00000604104 1402 ntBASIC19.41■□□□□ 0.7
NICN1Q9BSH3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.4■□□□□ 0.7
NICN1Q9BSH3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.4■□□□□ 0.7
NICN1Q9BSH3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NICN1Q9BSH3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.39■□□□□ 0.7
NICN1Q9BSH3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 RNF126P1-201ENST00000567452 1320 ntBASIC19.39■□□□□ 0.69
NICN1Q9BSH3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NICN1Q9BSH3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NICN1Q9BSH3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NICN1Q9BSH3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NICN1Q9BSH3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NICN1Q9BSH3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.38■□□□□ 0.69
NICN1Q9BSH3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NICN1Q9BSH3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 DUX4L9-201ENST00000449051 1259 ntBASIC19.37■□□□□ 0.69
NICN1Q9BSH3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NICN1Q9BSH3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 PKD1P6-201ENST00000343738 4769 ntBASIC19.36■□□□□ 0.69
NICN1Q9BSH3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.36■□□□□ 0.69
NICN1Q9BSH3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 MIR6765-201ENST00000614092 87 ntBASIC19.36■□□□□ 0.69
NICN1Q9BSH3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NICN1Q9BSH3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.35■□□□□ 0.69
NICN1Q9BSH3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NICN1Q9BSH3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NICN1Q9BSH3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NICN1Q9BSH3 AL022069.1-201ENST00000568025 1636 ntBASIC19.34■□□□□ 0.69
NICN1Q9BSH3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NICN1Q9BSH3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NICN1Q9BSH3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NICN1Q9BSH3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NICN1Q9BSH3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.33■□□□□ 0.69
NICN1Q9BSH3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.33■□□□□ 0.69
NICN1Q9BSH3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NICN1Q9BSH3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NICN1Q9BSH3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NICN1Q9BSH3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.33■□□□□ 0.68
NICN1Q9BSH3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms