Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A7Q99884 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
SLC6A7Q99884 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A7Q99884 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A7Q99884 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC6A7Q99884 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SLC6A7Q99884 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A7Q99884 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A7Q99884 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC6A7Q99884 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC6A7Q99884 AC019171.1-201ENST00000601251 1056 ntBASIC19.64■□□□□ 0.73
SLC6A7Q99884 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC6A7Q99884 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A7Q99884 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A7Q99884 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC6A7Q99884 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC6A7Q99884 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A7Q99884 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC6A7Q99884 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC6A7Q99884 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC6A7Q99884 RPS2P7-201ENST00000447334 885 ntBASIC19.63■□□□□ 0.73
SLC6A7Q99884 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A7Q99884 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SLC6A7Q99884 HLA-L-211ENST00000482052 1765 ntBASIC19.62■□□□□ 0.73
SLC6A7Q99884 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A7Q99884 AL356441.2-201ENST00000443009 864 ntBASIC19.62■□□□□ 0.73
SLC6A7Q99884 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC6A7Q99884 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A7Q99884 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A7Q99884 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A7Q99884 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SLC6A7Q99884 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A7Q99884 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A7Q99884 AC239859.2-201ENST00000444165 318 ntBASIC19.61■□□□□ 0.73
SLC6A7Q99884 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A7Q99884 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC6A7Q99884 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A7Q99884 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC6A7Q99884 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A7Q99884 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A7Q99884 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A7Q99884 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SLC6A7Q99884 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A7Q99884 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC6A7Q99884 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SLC6A7Q99884 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A7Q99884 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A7Q99884 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC6A7Q99884 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A7Q99884 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A7Q99884 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A7Q99884 LONRF2P2-201ENST00000439212 571 ntBASIC19.58■□□□□ 0.72
SLC6A7Q99884 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A7Q99884 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.58■□□□□ 0.72
SLC6A7Q99884 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A7Q99884 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC6A7Q99884 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A7Q99884 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A7Q99884 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC6A7Q99884 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SLC6A7Q99884 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A7Q99884 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A7Q99884 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A7Q99884 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A7Q99884 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms