Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 KRT125P-201ENST00000546827 989 ntBASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 AC092068.2-201ENST00000590491 1708 ntBASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.15■□□□□ 0.98
MS4A4EQ96PG1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.14■□□□□ 0.98
MS4A4EQ96PG1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MS4A4EQ96PG1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
MS4A4EQ96PG1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MS4A4EQ96PG1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.13■□□□□ 0.97
MS4A4EQ96PG1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 AC009299.2-201ENST00000482477 511 ntBASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A4EQ96PG1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A4EQ96PG1 AL451085.2-201ENST00000605085 799 ntBASIC21.11■□□□□ 0.97
MS4A4EQ96PG1 MIR6722-201ENST00000617286 78 ntBASIC21.11■□□□□ 0.97
MS4A4EQ96PG1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.11■□□□□ 0.97
MS4A4EQ96PG1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A4EQ96PG1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.11■□□□□ 0.97
MS4A4EQ96PG1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MS4A4EQ96PG1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.1■□□□□ 0.97
MS4A4EQ96PG1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 AC092028.1-203ENST00000608262 953 ntBASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms