Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 AF131216.4-201ENST00000638924 1588 ntBASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN4Q96NZ1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 AC068473.5-201ENST00000616428 2072 ntBASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 KRT18P24-201ENST00000344739 1156 ntBASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
FOXN4Q96NZ1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FOXN4Q96NZ1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 GUSBP5-201ENST00000418136 578 ntBASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FOXN4Q96NZ1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 ANOS2P-203ENST00000472227 1816 ntBASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXN4Q96NZ1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 AL161729.1-201ENST00000604104 1402 ntBASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXN4Q96NZ1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 AC239859.2-201ENST00000444165 318 ntBASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 ALDH1A3-203ENST00000557963 1670 ntBASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN4Q96NZ1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN4Q96NZ1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN4Q96NZ1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
FOXN4Q96NZ1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN4Q96NZ1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.18■□□□□ 0.82
FOXN4Q96NZ1 AC131212.1-201ENST00000613771 668 ntBASIC20.18■□□□□ 0.82
FOXN4Q96NZ1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms