Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CFAP53Q96M91 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CFAP53Q96M91 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CFAP53Q96M91 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFAP53Q96M91 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CFAP53Q96M91 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.43■■■□□ 2.46
CFAP53Q96M91 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.43■■■□□ 2.46
CFAP53Q96M91 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.43■■■□□ 2.46
CFAP53Q96M91 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CFAP53Q96M91 AC009102.2-201ENST00000606772 1639 ntBASIC30.43■■■□□ 2.46
CFAP53Q96M91 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.42■■■□□ 2.46
CFAP53Q96M91 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.42■■■□□ 2.46
CFAP53Q96M91 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CFAP53Q96M91 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CFAP53Q96M91 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CFAP53Q96M91 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CFAP53Q96M91 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.41■■■□□ 2.46
CFAP53Q96M91 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CFAP53Q96M91 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CFAP53Q96M91 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
CFAP53Q96M91 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CFAP53Q96M91 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP53Q96M91 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP53Q96M91 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP53Q96M91 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.4■■■□□ 2.46
CFAP53Q96M91 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP53Q96M91 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.4■■■□□ 2.46
CFAP53Q96M91 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP53Q96M91 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.4■■■□□ 2.46
CFAP53Q96M91 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.39■■■□□ 2.46
CFAP53Q96M91 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CFAP53Q96M91 SRD5A1P1-201ENST00000442297 786 ntBASIC30.39■■■□□ 2.46
CFAP53Q96M91 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CFAP53Q96M91 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CFAP53Q96M91 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CFAP53Q96M91 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFAP53Q96M91 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFAP53Q96M91 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
CFAP53Q96M91 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
CFAP53Q96M91 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.37■■■□□ 2.45
CFAP53Q96M91 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFAP53Q96M91 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
CFAP53Q96M91 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFAP53Q96M91 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.37■■■□□ 2.45
CFAP53Q96M91 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.37■■■□□ 2.45
CFAP53Q96M91 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP53Q96M91 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP53Q96M91 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP53Q96M91 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP53Q96M91 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.36■■■□□ 2.45
CFAP53Q96M91 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP53Q96M91 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP53Q96M91 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP53Q96M91 ABCB10P4-201ENST00000566803 2184 ntBASIC30.35■■■□□ 2.45
CFAP53Q96M91 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP53Q96M91 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP53Q96M91 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP53Q96M91 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP53Q96M91 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP53Q96M91 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP53Q96M91 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP53Q96M91 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.34■■■□□ 2.45
CFAP53Q96M91 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP53Q96M91 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CFAP53Q96M91 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP53Q96M91 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP53Q96M91 C17orf82-201ENST00000623772 1530 ntBASIC30.33■■■□□ 2.45
CFAP53Q96M91 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.33■■■□□ 2.45
CFAP53Q96M91 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CFAP53Q96M91 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP53Q96M91 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CFAP53Q96M91 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP53Q96M91 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.33■■■□□ 2.45
CFAP53Q96M91 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.32■■■□□ 2.44
CFAP53Q96M91 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.32■■■□□ 2.44
CFAP53Q96M91 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP53Q96M91 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP53Q96M91 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.31■■■□□ 2.44
CFAP53Q96M91 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
CFAP53Q96M91 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP53Q96M91 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
CFAP53Q96M91 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.3■■■□□ 2.44
CFAP53Q96M91 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP53Q96M91 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.3■■■□□ 2.44
CFAP53Q96M91 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP53Q96M91 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP53Q96M91 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.3■■■□□ 2.44
CFAP53Q96M91 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP53Q96M91 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CFAP53Q96M91 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP53Q96M91 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP53Q96M91 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP53Q96M91 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP53Q96M91 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CFAP53Q96M91 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.28■■■□□ 2.44
CFAP53Q96M91 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CFAP53Q96M91 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CFAP53Q96M91 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.28■■■□□ 2.44
CFAP53Q96M91 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.28■■■□□ 2.44
CFAP53Q96M91 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms