Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 MIR3181-201ENST00000578512 73 ntBASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 MIR5787-201ENST00000611784 55 ntBASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC74BQ96LY2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC74BQ96LY2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC74BQ96LY2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC74BQ96LY2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC74BQ96LY2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC74BQ96LY2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC74BQ96LY2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC74BQ96LY2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
CCDC74BQ96LY2 AC022211.4-201ENST00000625094 2161 ntBASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC74BQ96LY2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 AC092666.2-201ENST00000613287 246 ntBASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC74BQ96LY2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC74BQ96LY2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 pRNA.6-201ENST00000610482 90 ntBASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 pRNA.5-201ENST00000612139 90 ntBASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 pRNA.11-201ENST00000618423 90 ntBASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 pRNA.13-201ENST00000619112 90 ntBASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC74BQ96LY2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC74BQ96LY2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC74BQ96LY2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC74BQ96LY2 AC233992.3-201ENST00000607491 485 ntBASIC21.66■■□□□ 1.06
CCDC74BQ96LY2 AP003733.4-201ENST00000623785 1697 ntBASIC21.66■■□□□ 1.06
CCDC74BQ96LY2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 AC135731.1-201ENST00000569415 2548 ntBASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 IRS3P-201ENST00000223076 1006 ntBASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 BX842568.3-201ENST00000418104 571 ntBASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 MIR6821-201ENST00000617625 74 ntBASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC74BQ96LY2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC74BQ96LY2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC74BQ96LY2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC74BQ96LY2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC74BQ96LY2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC74BQ96LY2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.64■■□□□ 1.05
CCDC74BQ96LY2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC74BQ96LY2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC74BQ96LY2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC74BQ96LY2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC74BQ96LY2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms