Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TIMD4Q96H15 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.04■□□□□ 0.64
TIMD4Q96H15 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.03■□□□□ 0.64
TIMD4Q96H15 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.03■□□□□ 0.64
TIMD4Q96H15 AC110285.6-201ENST00000617652 491 ntBASIC19.03■□□□□ 0.64
TIMD4Q96H15 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.03■□□□□ 0.64
TIMD4Q96H15 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 AC009102.2-201ENST00000606772 1639 ntBASIC19.03■□□□□ 0.64
TIMD4Q96H15 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TIMD4Q96H15 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.02■□□□□ 0.64
TIMD4Q96H15 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.02■□□□□ 0.64
TIMD4Q96H15 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 AC241377.3-202ENST00000626088 1088 ntBASIC19.02■□□□□ 0.64
TIMD4Q96H15 AC241585.3-202ENST00000628937 1088 ntBASIC19.02■□□□□ 0.64
TIMD4Q96H15 AC245100.8-202ENST00000629247 1058 ntBASIC19.02■□□□□ 0.64
TIMD4Q96H15 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TIMD4Q96H15 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TIMD4Q96H15 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMD4Q96H15 AC135731.1-201ENST00000569415 2548 ntBASIC19.01■□□□□ 0.63
TIMD4Q96H15 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMD4Q96H15 UNC93B3-201ENST00000308076 687 ntBASIC19.01■□□□□ 0.63
TIMD4Q96H15 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 MIR638-201ENST00000385237 100 ntBASIC19.01■□□□□ 0.63
TIMD4Q96H15 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 PBX2P1-201ENST00000493219 1291 ntBASIC19.01■□□□□ 0.63
TIMD4Q96H15 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TIMD4Q96H15 AC133561.4-201ENST00000566112 224 ntBASIC19.01■□□□□ 0.63
TIMD4Q96H15 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMD4Q96H15 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMD4Q96H15 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TIMD4Q96H15 SYT6-210ENST00000641643 1587 ntBASIC19.01■□□□□ 0.63
TIMD4Q96H15 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
TIMD4Q96H15 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TIMD4Q96H15 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMD4Q96H15 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TIMD4Q96H15 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMD4Q96H15 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMD4Q96H15 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19■□□□□ 0.63
TIMD4Q96H15 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMD4Q96H15 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19■□□□□ 0.63
TIMD4Q96H15 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMD4Q96H15 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TIMD4Q96H15 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMD4Q96H15 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19■□□□□ 0.63
TIMD4Q96H15 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TIMD4Q96H15 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 AC141586.4-201ENST00000624558 1573 ntBASIC18.99■□□□□ 0.63
TIMD4Q96H15 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 AL136162.1-201ENST00000607711 1078 ntBASIC18.99■□□□□ 0.63
TIMD4Q96H15 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMD4Q96H15 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 AC135279.3-201ENST00000610945 1311 ntBASIC18.99■□□□□ 0.63
TIMD4Q96H15 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMD4Q96H15 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.99■□□□□ 0.63
TIMD4Q96H15 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMD4Q96H15 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMD4Q96H15 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMD4Q96H15 AC106739.1-201ENST00000617035 715 ntBASIC18.98■□□□□ 0.63
TIMD4Q96H15 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms