Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 DUX4L19-201ENST00000557448 1267 ntBASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 AC141586.4-201ENST00000624558 1573 ntBASIC25.48■■□□□ 1.67
ATP6V0A1Q93050 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A1Q93050 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A1Q93050 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A1Q93050 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.47■■□□□ 1.67
ATP6V0A1Q93050 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A1Q93050 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.47■■□□□ 1.67
ATP6V0A1Q93050 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ATP6V0A1Q93050 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.46■■□□□ 1.67
ATP6V0A1Q93050 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.46■■□□□ 1.67
ATP6V0A1Q93050 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ATP6V0A1Q93050 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
ATP6V0A1Q93050 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ATP6V0A1Q93050 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.45■■□□□ 1.67
ATP6V0A1Q93050 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.45■■□□□ 1.67
ATP6V0A1Q93050 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
ATP6V0A1Q93050 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 AL139125.2-201ENST00000623134 1869 ntBASIC25.45■■□□□ 1.66
ATP6V0A1Q93050 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 LINC01124-201ENST00000409786 2117 ntBASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 LINC00543-201ENST00000567234 1845 ntBASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
ATP6V0A1Q93050 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 AC092171.4-201ENST00000609130 632 ntBASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 SYT6-210ENST00000641643 1587 ntBASIC25.43■■□□□ 1.66
ATP6V0A1Q93050 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.42■■□□□ 1.66
ATP6V0A1Q93050 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.41■■□□□ 1.66
ATP6V0A1Q93050 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP6V0A1Q93050 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.41■■□□□ 1.66
ATP6V0A1Q93050 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP6V0A1Q93050 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.41■■□□□ 1.66
ATP6V0A1Q93050 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ATP6V0A1Q93050 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.41■■□□□ 1.66
ATP6V0A1Q93050 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 AL136967.2-201ENST00000623968 743 ntBASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATP6V0A1Q93050 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 AC009102.2-201ENST00000606772 1639 ntBASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 AF213884.3-201ENST00000563833 479 ntBASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.39■■□□□ 1.66
ATP6V0A1Q93050 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ATP6V0A1Q93050 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.39■■□□□ 1.65
ATP6V0A1Q93050 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ATP6V0A1Q93050 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms