Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC011551.1-201ENST00000614101 683 ntBASIC17.84■□□□□ 0.45
NPIPB3Q92617 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPB3Q92617 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPB3Q92617 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPB3Q92617 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPB3Q92617 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPB3Q92617 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPB3Q92617 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPB3Q92617 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.83■□□□□ 0.44
NPIPB3Q92617 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPB3Q92617 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.83■□□□□ 0.44
NPIPB3Q92617 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPB3Q92617 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPB3Q92617 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NPIPB3Q92617 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPB3Q92617 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NPIPB3Q92617 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPB3Q92617 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NPIPB3Q92617 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPB3Q92617 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.82■□□□□ 0.44
NPIPB3Q92617 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPB3Q92617 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NPIPB3Q92617 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPB3Q92617 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPB3Q92617 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NPIPB3Q92617 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
NPIPB3Q92617 ALDH1A3-203ENST00000557963 1670 ntBASIC17.81■□□□□ 0.44
NPIPB3Q92617 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPB3Q92617 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 AL117328.2-201ENST00000624617 1940 ntBASIC17.81■□□□□ 0.44
NPIPB3Q92617 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPB3Q92617 AC139795.1-202ENST00000500444 432 ntBASIC17.81■□□□□ 0.44
NPIPB3Q92617 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NPIPB3Q92617 AC131274.2-201ENST00000580697 1507 ntBASIC17.81■□□□□ 0.44
NPIPB3Q92617 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 AC233723.2-201ENST00000623798 2106 ntBASIC17.81■□□□□ 0.44
NPIPB3Q92617 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPB3Q92617 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NPIPB3Q92617 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NPIPB3Q92617 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPB3Q92617 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NPIPB3Q92617 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NPIPB3Q92617 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPB3Q92617 AC022616.5-201ENST00000518796 181 ntBASIC17.8■□□□□ 0.44
NPIPB3Q92617 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPB3Q92617 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPB3Q92617 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPB3Q92617 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPB3Q92617 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 DUX4L18-201ENST00000553347 1267 ntBASIC17.79■□□□□ 0.44
NPIPB3Q92617 AC019171.1-201ENST00000601251 1056 ntBASIC17.79■□□□□ 0.44
NPIPB3Q92617 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
NPIPB3Q92617 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPIPB3Q92617 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPIPB3Q92617 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPIPB3Q92617 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NPIPB3Q92617 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 PKD1P6-201ENST00000343738 4769 ntBASIC17.79■□□□□ 0.44
NPIPB3Q92617 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPB3Q92617 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NPIPB3Q92617 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.78■□□□□ 0.44
NPIPB3Q92617 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NPIPB3Q92617 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPB3Q92617 C1orf229-201ENST00000623686 2258 ntBASIC17.78■□□□□ 0.44
NPIPB3Q92617 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.78■□□□□ 0.44
NPIPB3Q92617 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPB3Q92617 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.78■□□□□ 0.44
NPIPB3Q92617 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPB3Q92617 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NPIPB3Q92617 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPB3Q92617 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPB3Q92617 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NPIPB3Q92617 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPB3Q92617 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPB3Q92617 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPB3Q92617 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPB3Q92617 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPB3Q92617 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms