Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S1Q92572 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.98■□□□□ 0.79
AP3S1Q92572 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S1Q92572 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP3S1Q92572 ESRRAP2-201ENST00000418437 1549 ntBASIC19.97■□□□□ 0.79
AP3S1Q92572 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3S1Q92572 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
AP3S1Q92572 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
AP3S1Q92572 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3S1Q92572 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP3S1Q92572 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3S1Q92572 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
AP3S1Q92572 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L13-201ENST00000554103 1267 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L15-201ENST00000611059 1267 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L23-201ENST00000615195 1269 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L24-201ENST00000617576 1269 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L22-201ENST00000618238 1269 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L20-201ENST00000619712 1269 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L21-201ENST00000622058 1269 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L10-201ENST00000622460 1267 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 DUX4L25-201ENST00000624915 1269 ntBASIC19.96■□□□□ 0.79
AP3S1Q92572 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.96■□□□□ 0.79
AP3S1Q92572 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
AP3S1Q92572 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.95■□□□□ 0.78
AP3S1Q92572 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.95■□□□□ 0.78
AP3S1Q92572 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3S1Q92572 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.95■□□□□ 0.78
AP3S1Q92572 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP3S1Q92572 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.94■□□□□ 0.78
AP3S1Q92572 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S1Q92572 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S1Q92572 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S1Q92572 LINC01971-201ENST00000617888 1048 ntBASIC19.94■□□□□ 0.78
AP3S1Q92572 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S1Q92572 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S1Q92572 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP3S1Q92572 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.94■□□□□ 0.78
AP3S1Q92572 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S1Q92572 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S1Q92572 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP3S1Q92572 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
AP3S1Q92572 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S1Q92572 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP3S1Q92572 AL137060.1-201ENST00000618151 2648 ntBASIC19.93■□□□□ 0.78
AP3S1Q92572 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.93■□□□□ 0.78
AP3S1Q92572 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.93■□□□□ 0.78
AP3S1Q92572 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S1Q92572 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S1Q92572 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3S1Q92572 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
AP3S1Q92572 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S1Q92572 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S1Q92572 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S1Q92572 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.92■□□□□ 0.78
AP3S1Q92572 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.92■□□□□ 0.78
AP3S1Q92572 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S1Q92572 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S1Q92572 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP3S1Q92572 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S1Q92572 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S1Q92572 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3S1Q92572 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S1Q92572 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3S1Q92572 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3S1Q92572 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S1Q92572 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S1Q92572 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
AP3S1Q92572 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.91■□□□□ 0.78
AP3S1Q92572 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
AP3S1Q92572 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S1Q92572 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S1Q92572 HLA-V-202ENST00000446817 847 ntBASIC19.9■□□□□ 0.78
AP3S1Q92572 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.9■□□□□ 0.78
AP3S1Q92572 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
AP3S1Q92572 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S1Q92572 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S1Q92572 AL161729.1-201ENST00000604104 1402 ntBASIC19.9■□□□□ 0.78
AP3S1Q92572 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S1Q92572 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
AP3S1Q92572 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.9■□□□□ 0.78
AP3S1Q92572 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.9■□□□□ 0.78
AP3S1Q92572 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AP3S1Q92572 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
AP3S1Q92572 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
AP3S1Q92572 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
AP3S1Q92572 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
AP3S1Q92572 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S1Q92572 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.89■□□□□ 0.77
AP3S1Q92572 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S1Q92572 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S1Q92572 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms