Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM4Q8WVI0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.4■□□□□ 0.7
SMIM4Q8WVI0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM4Q8WVI0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.39■□□□□ 0.69
SMIM4Q8WVI0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
SMIM4Q8WVI0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
SMIM4Q8WVI0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 SLC25A24-204ENST00000569674 2357 ntBASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM4Q8WVI0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 C11orf96-202ENST00000528572 1834 ntBASIC19.35■□□□□ 0.69
SMIM4Q8WVI0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SMIM4Q8WVI0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 AC092053.2-201ENST00000640557 1818 ntBASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SMIM4Q8WVI0 KRT18P10-201ENST00000388836 1287 ntBASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms