Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF138Q8WVD3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF138Q8WVD3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF138Q8WVD3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF138Q8WVD3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF138Q8WVD3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF138Q8WVD3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF138Q8WVD3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF138Q8WVD3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF138Q8WVD3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 MIR4466-201ENST00000606121 54 ntBASIC20.66■□□□□ 0.9
RNF138Q8WVD3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 C17orf82-201ENST00000623772 1530 ntBASIC20.66■□□□□ 0.9
RNF138Q8WVD3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNF138Q8WVD3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF138Q8WVD3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF138Q8WVD3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
RNF138Q8WVD3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF138Q8WVD3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF138Q8WVD3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF138Q8WVD3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF138Q8WVD3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF138Q8WVD3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF138Q8WVD3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms