Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SH3RF2Q8TEC5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 C17orf82-201ENST00000623772 1530 ntBASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 SERBP1P1-201ENST00000396021 1160 ntBASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SH3RF2Q8TEC5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3RF2Q8TEC5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF2Q8TEC5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.58■■□□□ 1.37
SH3RF2Q8TEC5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF2Q8TEC5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3RF2Q8TEC5 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.58■■□□□ 1.37
SH3RF2Q8TEC5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.58■■□□□ 1.37
SH3RF2Q8TEC5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SH3RF2Q8TEC5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.58■■□□□ 1.36
SH3RF2Q8TEC5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.58■■□□□ 1.36
SH3RF2Q8TEC5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 AP003733.4-201ENST00000623785 1697 ntBASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 AF213884.3-201ENST00000563833 479 ntBASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 MIR4767-201ENST00000582827 78 ntBASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SH3RF2Q8TEC5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 AL136967.2-201ENST00000623968 743 ntBASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 ALDH1A3-203ENST00000557963 1670 ntBASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 AC142381.3-201ENST00000568208 1670 ntBASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF2Q8TEC5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 AP001330.3-201ENST00000520123 633 ntBASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SH3RF2Q8TEC5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 AC241377.3-202ENST00000626088 1088 ntBASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 AC241585.3-202ENST00000628937 1088 ntBASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 AC245100.8-202ENST00000629247 1058 ntBASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.54■■□□□ 1.36
SH3RF2Q8TEC5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF2Q8TEC5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF2Q8TEC5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF2Q8TEC5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF2Q8TEC5 MIR939-201ENST00000401314 82 ntBASIC23.53■■□□□ 1.36
SH3RF2Q8TEC5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF2Q8TEC5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 AC006455.2-201ENST00000429931 906 ntBASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 AL138724.1-201ENST00000606771 1088 ntBASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.52■■□□□ 1.36
SH3RF2Q8TEC5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms