Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SSH3Q8TE77 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SSH3Q8TE77 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
SSH3Q8TE77 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.2■■■□□ 2.1
SSH3Q8TE77 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SSH3Q8TE77 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SSH3Q8TE77 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SSH3Q8TE77 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.19■■■□□ 2.1
SSH3Q8TE77 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
SSH3Q8TE77 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.18■■■□□ 2.1
SSH3Q8TE77 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.18■■■□□ 2.1
SSH3Q8TE77 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SSH3Q8TE77 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.18■■■□□ 2.1
SSH3Q8TE77 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.18■■■□□ 2.1
SSH3Q8TE77 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.18■■■□□ 2.1
SSH3Q8TE77 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SSH3Q8TE77 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SSH3Q8TE77 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SSH3Q8TE77 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SSH3Q8TE77 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
SSH3Q8TE77 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
SSH3Q8TE77 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SSH3Q8TE77 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SSH3Q8TE77 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SSH3Q8TE77 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
SSH3Q8TE77 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SSH3Q8TE77 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SSH3Q8TE77 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.17■■■□□ 2.1
SSH3Q8TE77 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.17■■■□□ 2.1
SSH3Q8TE77 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SSH3Q8TE77 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.17■■■□□ 2.1
SSH3Q8TE77 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.16■■■□□ 2.1
SSH3Q8TE77 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.16■■■□□ 2.1
SSH3Q8TE77 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.16■■■□□ 2.1
SSH3Q8TE77 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SSH3Q8TE77 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SSH3Q8TE77 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.16■■■□□ 2.1
SSH3Q8TE77 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SSH3Q8TE77 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SSH3Q8TE77 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
SSH3Q8TE77 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.15■■■□□ 2.1
SSH3Q8TE77 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.15■■■□□ 2.1
SSH3Q8TE77 AL356740.2-201ENST00000601559 647 ntBASIC28.15■■■□□ 2.1
SSH3Q8TE77 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SSH3Q8TE77 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.15■■■□□ 2.1
SSH3Q8TE77 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SSH3Q8TE77 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SSH3Q8TE77 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.14■■■□□ 2.1
SSH3Q8TE77 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.14■■■□□ 2.1
SSH3Q8TE77 AL512631.2-201ENST00000604634 923 ntBASIC28.14■■■□□ 2.1
SSH3Q8TE77 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SSH3Q8TE77 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SSH3Q8TE77 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SSH3Q8TE77 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
SSH3Q8TE77 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SSH3Q8TE77 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SSH3Q8TE77 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.13■■■□□ 2.09
SSH3Q8TE77 AC009102.2-201ENST00000606772 1639 ntBASIC28.13■■■□□ 2.09
SSH3Q8TE77 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SSH3Q8TE77 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SSH3Q8TE77 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.12■■■□□ 2.09
SSH3Q8TE77 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.12■■■□□ 2.09
SSH3Q8TE77 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.12■■■□□ 2.09
SSH3Q8TE77 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SSH3Q8TE77 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SSH3Q8TE77 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SSH3Q8TE77 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SSH3Q8TE77 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SSH3Q8TE77 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.11■■■□□ 2.09
SSH3Q8TE77 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SSH3Q8TE77 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.11■■■□□ 2.09
SSH3Q8TE77 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SSH3Q8TE77 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SSH3Q8TE77 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
SSH3Q8TE77 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.1■■■□□ 2.09
SSH3Q8TE77 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SSH3Q8TE77 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SSH3Q8TE77 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SSH3Q8TE77 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.1■■■□□ 2.09
SSH3Q8TE77 AC131212.1-201ENST00000613771 668 ntBASIC28.1■■■□□ 2.09
SSH3Q8TE77 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SSH3Q8TE77 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
SSH3Q8TE77 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
SSH3Q8TE77 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.09■■■□□ 2.09
SSH3Q8TE77 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.09■■■□□ 2.09
SSH3Q8TE77 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.09■■■□□ 2.09
SSH3Q8TE77 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.09■■■□□ 2.09
SSH3Q8TE77 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SSH3Q8TE77 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SSH3Q8TE77 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
SSH3Q8TE77 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms