Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
RDH11Q8TC12 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RDH11Q8TC12 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RDH11Q8TC12 AC022616.5-201ENST00000518796 181 ntBASIC22.32■■□□□ 1.16
RDH11Q8TC12 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RDH11Q8TC12 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.32■■□□□ 1.16
RDH11Q8TC12 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.32■■□□□ 1.16
RDH11Q8TC12 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
RDH11Q8TC12 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RDH11Q8TC12 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RDH11Q8TC12 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RDH11Q8TC12 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RDH11Q8TC12 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RDH11Q8TC12 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RDH11Q8TC12 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.31■■□□□ 1.16
RDH11Q8TC12 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.31■■□□□ 1.16
RDH11Q8TC12 AC019171.1-201ENST00000601251 1056 ntBASIC22.31■■□□□ 1.16
RDH11Q8TC12 AC129492.7-201ENST00000622992 756 ntBASIC22.31■■□□□ 1.16
RDH11Q8TC12 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RDH11Q8TC12 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RDH11Q8TC12 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RDH11Q8TC12 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
RDH11Q8TC12 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.3■■□□□ 1.16
RDH11Q8TC12 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RDH11Q8TC12 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.3■■□□□ 1.16
RDH11Q8TC12 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.3■■□□□ 1.16
RDH11Q8TC12 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RDH11Q8TC12 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RDH11Q8TC12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RDH11Q8TC12 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RDH11Q8TC12 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RDH11Q8TC12 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.29■■□□□ 1.16
RDH11Q8TC12 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.29■■□□□ 1.16
RDH11Q8TC12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RDH11Q8TC12 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.29■■□□□ 1.16
RDH11Q8TC12 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RDH11Q8TC12 U85056.1-201ENST00000616429 682 ntBASIC22.29■■□□□ 1.16
RDH11Q8TC12 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RDH11Q8TC12 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RDH11Q8TC12 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RDH11Q8TC12 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.28■■□□□ 1.16
RDH11Q8TC12 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
RDH11Q8TC12 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RDH11Q8TC12 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.28■■□□□ 1.16
RDH11Q8TC12 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.28■■□□□ 1.16
RDH11Q8TC12 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.28■■□□□ 1.16
RDH11Q8TC12 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.28■■□□□ 1.16
RDH11Q8TC12 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH11Q8TC12 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH11Q8TC12 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH11Q8TC12 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.27■■□□□ 1.16
RDH11Q8TC12 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH11Q8TC12 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH11Q8TC12 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH11Q8TC12 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RDH11Q8TC12 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH11Q8TC12 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RDH11Q8TC12 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RDH11Q8TC12 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RDH11Q8TC12 GUSBP5-202ENST00000510805 1989 ntBASIC22.27■■□□□ 1.15
RDH11Q8TC12 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RDH11Q8TC12 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RDH11Q8TC12 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RDH11Q8TC12 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RDH11Q8TC12 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.26■■□□□ 1.15
RDH11Q8TC12 NTF6A-201ENST00000591175 560 ntBASIC22.26■■□□□ 1.15
RDH11Q8TC12 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.26■■□□□ 1.15
RDH11Q8TC12 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RDH11Q8TC12 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RDH11Q8TC12 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.25■■□□□ 1.15
RDH11Q8TC12 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH11Q8TC12 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH11Q8TC12 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH11Q8TC12 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH11Q8TC12 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH11Q8TC12 ECEL1P1-201ENST00000373592 1742 ntBASIC22.25■■□□□ 1.15
RDH11Q8TC12 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RDH11Q8TC12 EP400NL-214ENST00000641289 2402 ntBASIC22.25■■□□□ 1.15
RDH11Q8TC12 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RDH11Q8TC12 LINC00526-201ENST00000581067 1875 ntBASIC22.24■■□□□ 1.15
RDH11Q8TC12 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RDH11Q8TC12 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
RDH11Q8TC12 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RDH11Q8TC12 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.24■■□□□ 1.15
RDH11Q8TC12 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.24■■□□□ 1.15
RDH11Q8TC12 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RDH11Q8TC12 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RDH11Q8TC12 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.24■■□□□ 1.15
RDH11Q8TC12 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RDH11Q8TC12 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms