Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.53□□□□□ -0.4
SPTSSBQ8NFR3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTSSBQ8NFR3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPTSSBQ8NFR3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPTSSBQ8NFR3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 AP002414.2-202ENST00000590929 1450 ntBASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SPTSSBQ8NFR3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SPTSSBQ8NFR3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 AC142381.3-201ENST00000568208 1670 ntBASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 AC007326.2-201ENST00000624224 7579 ntBASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPTSSBQ8NFR3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms